aurora/.github/workflows/tests.yaml at main · simpeg/aurora · GitHub

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name: Testing

on:
  push:
    branches:
      - '*'
  pull_request:
    branches:
      - '*'

jobs:
  setup-build:
    name: Ex1 (${{ matrix.python-version }}, ${{ matrix.os }})
    runs-on: ${{ matrix.os }}
    defaults:
      run:
        shell: bash
    strategy:
      fail-fast: true
      matrix:
        os: ["ubuntu-latest"]
        python-version: ["3.10", "3.11", "3.12"]

    steps:
      - uses: actions/checkout@v4

      - name: Install uv
        uses: astral-sh/setup-uv@v3
        with:
          version: "latest"

      - name: Set up Python ${{ matrix.python-version }}
        run: uv python install ${{ matrix.python-version }}

      - name: Cache MTH5 test files
        uses: actions/cache@v4
        with:
          path: ~/.cache/aurora
          key: mth5-test-files-${{ runner.os }}-${{ hashFiles('tests/conftest.py') }}
          restore-keys: |
            mth5-test-files-${{ runner.os }}-

      - name: Create virtual environment and install dependencies
        run: |
          uv venv --python ${{ matrix.python-version }}
          source .venv/bin/activate
          uv pip install --upgrade pip
          uv pip install 'setuptools<68'
          uv pip install -e ".[dev,test]"
          uv pip install git+https://github.com/kujaku11/mth5_test_data.git
          # Explicitly include nbconvert & ipykernel
          uv pip install jupyter nbconvert nbformat ipykernel pytest pytest-cov pytest-timeout codecov
          python -m ipykernel install --user --name "python3"

      - name: Install system dependencies
        run: |
          sudo apt-get update
          sudo apt-get install -y pandoc

      - name: Run Tests
        run: |
          source .venv/bin/activate
          pytest -s -v --cov=./ --cov-report=xml --cov=aurora -n auto tests

      - name: "Upload coverage reports to Codecov"
        uses: codecov/codecov-action@v4
        with:
          CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
          fail_ci_if_error: false
          flags: tests

      # Note: these conditions won't match python-version 3.10; adjust if desired.
      - name: Build Doc
        if: ${{ (github.ref == 'refs/heads/main') && (matrix.python-version == '3.8') }}
        run: |
          source .venv/bin/activate
          cd docs
          make html
          cd ..

      - name: GitHub Pages
        if: ${{ (github.ref == 'refs/heads/main') && (matrix.python-version == '3.8') }}
        uses: crazy-max/ghaction-github-pages@v2.5.0
        with:
          build_dir: docs/_build/html
          jekyll: false
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}