how to call snapatac2.ex.export_bigwig on cell indices directly?

[mkarikom]

Just wondering if there is a way to do something like:
snapatac2.ex.export_bigwig(...selection=)
where indices are individual cells?

[kaizhang]

You can create a membership list for the selected cells, e.g., "1" for selected cells, "0" for others. And then use groupby and selection to export the bigwig.

[mkarikom]

thanks!