Skip to content

5olg causing exception thrown when reading #425

@jsoerensen

Description

@jsoerensen

The following mmCIF file (5olg.cif) from the wwPDB/RCSB is causing this code:

for (auto row : block.find("_pdbx_refine_tls_group.", {

to throw a std::invalid_argument for the conversion from what looks like an blank string to an int.

I can catch the exception outside, but it seems like either the file is broken/not following convention or the algorithm has some incorrect assumptions.

Can you look into this, please?

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type
    No fields configured for issues without a type.

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions