From 3db7573a94a6621dc986d877c2b93cf188d0a81d Mon Sep 17 00:00:00 2001
From: Luke Zappia <luke@data-intuitive.com>
Date: Fri, 7 Mar 2025 13:30:29 +0100
Subject: [PATCH] Install reticulate v1.40.0 from GitHub

---
 src/methods/scdesign3_nb/config.vsh.yaml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/src/methods/scdesign3_nb/config.vsh.yaml b/src/methods/scdesign3_nb/config.vsh.yaml
index a5b51ccc..935c3930 100644
--- a/src/methods/scdesign3_nb/config.vsh.yaml
+++ b/src/methods/scdesign3_nb/config.vsh.yaml
@@ -39,10 +39,10 @@ engines:
   - type: docker
     image: openproblems/base_r:1.0.0
     setup:
-      - type: apt
-        packages: [r-bioc-singlecellexperiment, git]
       - type: r
-        github: SONGDONGYUAN1994/scDesign3
+        github:
+        - SONGDONGYUAN1994/scDesign3
+        - rstudio/reticulate@v1.40.0
 
 runners:
   - type: executable