PAM-OpenScience/_quarto.yml at main · nmfs-ost/PAM-OpenScience · GitHub

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project:
  type: website
  output-dir: _site

website:
  page-navigation: true
  title: "Open Sciences for NOAA Fisheries PAM"
  site-url: "https://nmfs-ost.github.io/PAM-OpenScience/"
  repo-url: "https://github.com/nmfs-ost/PAM-OpenScience"
  repo-actions: [edit, source, issue]
  favicon: images/favicon.ico

  page-footer:
    right: "This page is built with [Quarto](https://quarto.org/)."
    left: "&copy; CC-1.0"

  sidebar:
    background: "#D9E3E4"
    logo: "https://raw.githubusercontent.com/nmfs-opensci/assets/main/logo/nmfs-opensci-logo3.png"
    favicon: images/favicon.ico
    pinned: true
    align: center
    tools:
      - icon: globe
        href: https://nmfs-ost.github.io/PAM_National_Network/
        text: "National PAM Page"
      - icon: github
        href: https://github.com/nmfs-ost/PAM-OpenScience
        text: "PAM Open Science"

    style: "docked"
    search: true
    collapse-level: 1
    contents:
      - href: index.qmd
        text: Home

      - section: content/knowledge.qmd
        text: Sharing Knowledge
        contents:
          - content/Stack-Exchange.qmd
          - content/Zotero.qmd

      - section: content/coworking.qmd
        text: Co-Working
        contents:
          - content/CoWorkMeetings.qmd
          - content/writersWorkshop.qmd
          - content/journalClub.qmd
          - content/openscapes.qmd
      # - section: content/pathway.qmd
      #   text: Finding Your Path
      #   contents:
      #     - content/pathway-workflow.qmd
      #     - content/pathway-decision.qmd
      #     - content/pathway-path.qmd
      - section: content/labManual.qmd
        text: Lab Manual
        contents:
          - content/gettingStarted.qmd
          - content/organizeYml.qmd
          - content/createContent.qmd
          - section: content/gitCollaborate.qmd
            text: Github Collaboration
            contents:
             - content/issues.qmd
             - content/gitProject.qmd
             - content/gitDiscussions.qmd
             # - text: "Open Science Discussions"
             #   href: https://github.com/SAEL-SWFSC/OpenScience/discussions
      - section: content/organization.qmd
        text: Team Organization
        contents:
         - content/gitOrgs.qmd
         - content/gitProject.qmd
         - content/gitDiscussions.qmd

      - section: content/researchCompendium.qmd
        text: Research Compendium
        contents:
         - content/createCompendium.qmd
      # - section: "Working with Quarto"
      #   contents:
      #   - content/websiteBuild.qmd
      #   - content/tables.qmd
      - href: content/resources.qmd
        text: Resources
      - href: https://github.com/SAEL-SWFSC/OpenScience/discussions
        text: Discussion Board


      #        - section: content/knowledge.qmd
      #   text: Sharing Knowledge
      #   contents:
      #    - content/Stack-Exchange.qmd
      #    - content/Zotero.qmd
      # - section: content/coworking.qmd
      #   text: Co-Working
      #   contents:
      #     - content/writersWorkshop.qmd
      #     - content/journalClub.qmd
      # - section: content/openscapes.qmd
      #   text: Openscapes
      #   contents:
      #   - section: content/labManual.qmd
      #     text: Lab Manual
      #     contents:
      #     - content/gettingStarted.qmd
      #     - content/organizeYml.qmd
      #     - content/createContent.qmd
      #     - content/gitCollaborate.qmd
      #        # - content/issues.qmd
      #        # - content/gitProject.qmd
      #        # - content/gitDiscussions.qmd
      #   - section: content/organization.qmd
      #     text: Team Organization
      #     contents:
      #     - content/gitOrgs.qmd
      #     - content/gitProject.qmd
      #     - content/gitDiscussions.qmd
      #   - section: content/researchCompendium.qmd
      #     text: Research Compendium
      #     contents:
      #     - content/createCompendium.qmd
      # # - section: "Working with Quarto"
      # #   contents:
      # #   - content/websiteBuild.qmd
      # #   - content/tables.qmd
      # - href: content/resources.qmd
      #   text: Resources

resources:
  - output/*.drawio
  - output/*.svg
format:
  html:
    theme:
      light: [cosmo, theme.scss]
      dark: [cosmo, theme-dark.scss]
    code-copy: true
    code-overflow: wrap
    toc: true

filters:
  - include-files.lua
  - quarto