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Add --phasing-track to cooltools compartment calling

enhancementNew feature or requestNew feature or request

Status: Open.

#232 In nf-core/hic;

· GuidoBarzaghi opened on Sep 3, 2025

Merging replicates for analysis

enhancementNew feature or requestNew feature or request

Status: Open.

#223 In nf-core/hic;

· aperreault opened on May 7, 2025

Compress .allValidPairs and .txt files

enhancementNew feature or requestNew feature or request

Status: Open.

#220 In nf-core/hic;

· Alessandro201 opened on Apr 28, 2025

Improve multiQC report

enhancementNew feature or requestNew feature or request

Status: Open.

#190 In nf-core/hic;

· nservant opened on Jan 26, 2024

Add loop calling tools

enhancementNew feature or requestNew feature or request

Status: Open.

#189 In nf-core/hic;

· nservant opened on Jan 26, 2024

add calder2 module

enhancementNew feature or requestNew feature or request

Status: Open.

#188 In nf-core/hic;

· nservant opened on Jan 26, 2024

· 

version-2.2.0

Put FastQ File Splitting in a Dedicated Process

enhancementNew feature or requestNew feature or request

Status: Open.

#164 In nf-core/hic;

· ieres-amgen opened on May 17, 2023

Include pairtools protocol

enhancementNew feature or requestNew feature or request

Status: Open.

#162 In nf-core/hic;

· nservant opened on May 5, 2023

· 

version-2.2.0

Change bwt2_index input to take input tar/tar.gz file rather than path + base name

enhancementNew feature or requestNew feature or request

Status: Open.

#157 In nf-core/hic;

· IttaiEres opened on Apr 4, 2023

Chromap

enhancementNew feature or requestNew feature or request

Status: Open.

#134 In nf-core/hic;

· Johnsonzcode opened on Aug 14, 2022

update cooltools compartments

enhancementNew feature or requestNew feature or request

Status: Open.

#133 In nf-core/hic;

· nservant opened on Jul 29, 2022

perserve the qc pdf from hic pro

enhancementNew feature or requestNew feature or request

Status: Open.

#118 In nf-core/hic;

· yinshiyi opened on Feb 9, 2022