Why do the statistics of high and low methylation sites in the _cpg.bed file not agree with the results of REPORT? I see that the report is the result of the .json file generated from the call phase, but I still don't understand why it is different, obviously the total number of cpg sites is the same, but the percentage of high, medium and low is different.
Why do the statistics of high and low methylation sites in the _cpg.bed file not agree with the results of REPORT? I see that the report is the result of the .json file generated from the call phase, but I still don't understand why it is different, obviously the total number of cpg sites is the same, but the percentage of high, medium and low is different.