igvShiny/DESCRIPTION at master · gladkia/igvShiny · GitHub

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Package: igvShiny
Title: igvShiny: a wrapper of Integrative Genomics Viewer (IGV - an interactive
    tool for visualization and exploration integrated genomic data)
Version: 1.9.51
Date: 2026-09-30
Authors@R: c(
    person("Paul","Shannon", role = c("aut"),
    email = "paul.thurmond.shannon@gmail.com"),
    person("Arkadiusz", "Gladki", role=c("aut", "cre"),
    email="gladki.arkadiusz@gmail.com", comment = c(ORCID = "0000-0002-7059-6378")),
    person("Karolina","Scigocka", role = c("aut"),
    email = "scigocka.karolina@gmail.com"),
    person("Carolina", "Heimann", role = c("ctb"),
    email = "carolina.heimann@gmail.com"),
    person("Steffen", "Klasberg", role = c("ctb"),
    email = "klasberg@dkms-lab.de"),
    person("Vincent", "Carey", role = c("ctb"),
    email = "stvjc@channing.harvard.edu"),
    person("Parv", "Sachdeva", role = c("ctb"),
    email = "parv.sachdeva@sonomabio.com"),
    person("Mateusz", "Gladki", role = c("ctb"),
    email = "gladkiimateusz@gmail.com"),
    person("R Consortium", role = "fnd")
    )
Description: This package is a wrapper of Integrative Genomics Viewer (IGV).
    It comprises an htmlwidget version of IGV. It can be used as a module
    in Shiny apps.
URL: https://github.com/gladkia/igvShiny, https://gladkia.github.io/igvShiny/
BugReports: https://github.com/gladkia/igvShiny/issues
Depends:
    GenomicRanges,
    methods,
    shiny (>= 1.6.0)
Imports:
    BiocGenerics,
    checkmate,
    futile.logger,
    GenomeInfoDb,
    GenomeInfoDbData,
    htmlwidgets,
    httr,
    jsonlite,
    randomcoloR,
    stats,
    utils
Suggests:
    BiocStyle,
    bslib,
    covr,
    GenomicAlignments,
    knitr,
    Rhtslib,
    Rsamtools,
    rtracklayer,
    shinytest2,
    testthat,
    VariantAnnotation
biocViews: Software, ShinyApps, Sequencing, Coverage
License: MIT + file LICENSE
Encoding: UTF-8
Collate:
    'constants.R'
    'genomeSpec.R'
    'referenceCheck.R'
    'GWASTrack.R'
    'rangeServer.R'
    'igvShiny.R'
    'packages.R'
    'utils.R'
    'zzz.R'
RoxygenNote: 7.3.3
VignetteBuilder:
    knitr