Test & Lint Python

Update SpecAssay Check extension to v0.4.12 (#4254) #7103

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Run time

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Job	Run time
ruff	9s
pytest (windows-latest, 3.14)	8m 5s
pytest (macos-latest, 3.14)	7m 26s
pytest (macos-latest, 3.13)	7m 11s
pytest (ubuntu-latest, 3.13)	7m 34s
pytest (windows-latest, 3.13)	8m 35s
pytest (ubuntu-latest, 3.14)	7m 58s
	46m 58s