From 8b4b90ee32f1b1f596b038515a4a88ca6544e0b8 Mon Sep 17 00:00:00 2001
From: Ben Sherman <bentshermann@gmail.com>
Date: Thu, 13 Nov 2025 22:17:21 +0000
Subject: [PATCH] Update Nextflow

---
 .gitmodules                                                 | 6 +++---
 grammars.yml                                                | 6 +++---
 lib/linguist/languages.yml                                  | 2 +-
 vendor/README.md                                            | 2 +-
 ...ge-nextflow.dep.yml => vscode-language-nextflow.dep.yml} | 5 ++---
 5 files changed, 10 insertions(+), 11 deletions(-)
 rename vendor/licenses/git_submodule/{atom-language-nextflow.dep.yml => vscode-language-nextflow.dep.yml} (88%)

diff --git a/.gitmodules b/.gitmodules
index f2c90a1cad..50b18e92a9 100644
--- a/.gitmodules
+++ b/.gitmodules
@@ -317,9 +317,6 @@
 [submodule "vendor/grammars/atom-language-julia"]
 	path = vendor/grammars/atom-language-julia
 	url = https://github.com/JuliaEditorSupport/atom-language-julia
-[submodule "vendor/grammars/atom-language-nextflow"]
-	path = vendor/grammars/atom-language-nextflow
-	url = https://github.com/nextflow-io/atom-language-nextflow
 [submodule "vendor/grammars/atom-language-p4"]
 	path = vendor/grammars/atom-language-p4
 	url = https://github.com/TakeshiTseng/atom-language-p4
@@ -1413,6 +1410,9 @@
 [submodule "vendor/grammars/vscode-kolmafia-ash"]
 	path = vendor/grammars/vscode-kolmafia-ash
 	url = https://github.com/midgleyc/vscode-kolmafia-ash
+[submodule "vendor/grammars/vscode-language-nextflow"]
+	path = vendor/grammars/vscode-language-nextflow
+	url = https://github.com/nextflow-io/vscode-language-nextflow.git
 [submodule "vendor/grammars/vscode-lean"]
 	path = vendor/grammars/vscode-lean
 	url = https://github.com/leanprover/vscode-lean
diff --git a/grammars.yml b/grammars.yml
index 9da8a9b6a2..ccfdd1b82d 100644
--- a/grammars.yml
+++ b/grammars.yml
@@ -259,9 +259,6 @@ vendor/grammars/atom-language-innosetup:
 vendor/grammars/atom-language-julia:
 - source.julia
 - source.julia.console
-vendor/grammars/atom-language-nextflow:
-- source.nextflow
-- source.nextflow-groovy
 vendor/grammars/atom-language-p4:
 - source.p4
 vendor/grammars/atom-language-perl6:
@@ -1260,6 +1257,9 @@ vendor/grammars/vscode-kdl:
 - source.kdl
 vendor/grammars/vscode-kolmafia-ash:
 - source.ash
+vendor/grammars/vscode-language-nextflow:
+- source.nextflow
+- source.nextflow-config
 vendor/grammars/vscode-lean:
 - markdown.lean.codeblock
 - source.lean
diff --git a/lib/linguist/languages.yml b/lib/linguist/languages.yml
index 971b8138eb..7e2e8cba61 100644
--- a/lib/linguist/languages.yml
+++ b/lib/linguist/languages.yml
@@ -4943,7 +4943,7 @@ Nextflow:
   type: programming
   ace_mode: groovy
   tm_scope: source.nextflow
-  color: "#3ac486"
+  color: "#0DC09D"
   extensions:
   - ".nf"
   filenames:
diff --git a/vendor/README.md b/vendor/README.md
index a0ceb6b4e5..598faeee3e 100644
--- a/vendor/README.md
+++ b/vendor/README.md
@@ -407,7 +407,7 @@ This is a list of grammars that Linguist selects to provide syntax highlighting
 - **NetLinx+ERB:** [amclain/sublime-netlinx](https://github.com/amclain/sublime-netlinx)
 - **NetLogo:** [textmate/lisp.tmbundle](https://github.com/textmate/lisp.tmbundle)
 - **NewLisp:** [textmate/lisp.tmbundle](https://github.com/textmate/lisp.tmbundle)
-- **Nextflow:** [nextflow-io/atom-language-nextflow](https://github.com/nextflow-io/atom-language-nextflow)
+- **Nextflow:** [nextflow-io/vscode-language-nextflow](https://github.com/nextflow-io/vscode-language-nextflow)
 - **Nginx:** [william-voyek/vscode-nginx](https://github.com/william-voyek/vscode-nginx)
 - **Nickel:** [tweag/nickel](https://github.com/tweag/nickel)
 - **Nim:** [nim-lang/NimLime](https://github.com/nim-lang/NimLime)
diff --git a/vendor/licenses/git_submodule/atom-language-nextflow.dep.yml b/vendor/licenses/git_submodule/vscode-language-nextflow.dep.yml
similarity index 88%
rename from vendor/licenses/git_submodule/atom-language-nextflow.dep.yml
rename to vendor/licenses/git_submodule/vscode-language-nextflow.dep.yml
index d2edacf024..9f141b722b 100644
--- a/vendor/licenses/git_submodule/atom-language-nextflow.dep.yml
+++ b/vendor/licenses/git_submodule/vscode-language-nextflow.dep.yml
@@ -1,12 +1,11 @@
 ---
 type: git_submodule
-name: atom-language-nextflow
-version: 40387695d768dc7c9ab7b8594cd2c925fd254e47
+name: vscode-language-nextflow
+version: 13d3a2067eef8117cdea3e880d7f2bbde8c017a0
 license: mit
 licenses:
 - text: |-
     Copyright (c) 2018 Paolo Di Tommaso
-    Copyright (c) 2014-2017 Jakehp https://github.com/Jakehp/language-groovy
 
     Permission is hereby granted, free of charge, to any person obtaining a copy
     of this software and associated documentation files (the "Software"), to deal