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@bebatut bebatut commented Dec 5, 2025

This PR adds a learning pathway for MAGs building and annotation.
Some modules are currently commented out because the corresponding tutorials are under development. But @paulzierep and I need this learning pathway for a deliverable due next week.

bgruening
bgruening previously approved these changes Dec 6, 2025
tutorials:
- name: quality-control
topic: sequence-analysis

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Long-reads is also covered in the QC tutorial

topic: genome-annotation
- name: amr-gene-detection
topic: genome-annotation
---
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what about the full MAG one ?

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Which full MAG one?

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your MAG one :)

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I will not put it because only a part of the tutorial is interesting, and we can not link to a specific section. And if we could link to it, people would need to get the data, and then need to go through the full workflow.

paulzierep
paulzierep previously approved these changes Dec 8, 2025
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This first version is ready imo !

@bebatut bebatut merged commit f270a76 into galaxyproject:main Dec 8, 2025
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@bebatut bebatut deleted the mags_learning_pathway branch December 8, 2025 10:09
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3 participants