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feat: enhance IPFSSimpleAPI loading with fastapi module fallback #474
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| # AMD64 Python Package CI/CD | |
| # Based on generative-protein-binder-design repository patterns | |
| name: AMD64 Python Package | |
| on: | |
| push: | |
| branches: [ main, develop ] | |
| pull_request: | |
| branches: [ main, develop ] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.12", "3.13"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Cache pip dependencies | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt', '**/pyproject.toml') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get update -qq | |
| sudo apt-get install -y --no-install-recommends \ | |
| build-essential \ | |
| git \ | |
| curl \ | |
| wget \ | |
| ca-certificates \ | |
| pkg-config \ | |
| libffi-dev \ | |
| libssl-dev | |
| - name: Install Python dependencies | |
| run: | | |
| IPFS_KIT_EXTRAS=dev,full ./scripts/zero_touch_install.sh | |
| - name: Lint with flake8 | |
| run: | | |
| pip install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics --exclude=.git,__pycache__,build,dist,*.egg-info | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics --exclude=.git,__pycache__,build,dist,*.egg-info | |
| - name: Type checking with mypy | |
| run: | | |
| pip install mypy types-requests | |
| mypy . --ignore-missing-imports --exclude='build/|dist/|\.egg-info/' || true | |
| - name: Security check with bandit | |
| run: | | |
| pip install bandit | |
| bandit -r . -x ./tests/ -f json -o security-report.json || true | |
| if [ -f security-report.json ]; then cat security-report.json; fi | |
| - name: Test with pytest | |
| run: | | |
| pytest tests/ -v --cov=./ --cov-report=xml --cov-report=html --timeout=300 --maxfail=3 --ignore=tests/test_mcp_restoration.py | |
| timeout-minutes: 30 | |
| - name: Upload coverage reports | |
| uses: codecov/codecov-action@v3 | |
| if: matrix.python-version == '3.12' | |
| with: | |
| file: ./coverage.xml | |
| flags: unittests | |
| name: codecov-umbrella | |
| - name: Archive test results | |
| if: always() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test-results-${{ matrix.python-version }} | |
| path: | | |
| htmlcov/ | |
| security-report.json | |
| pytest.xml | |
| integration-tests: | |
| runs-on: ubuntu-latest | |
| needs: build | |
| if: github.event_name == 'pull_request' || github.ref == 'refs/heads/main' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python 3.11 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.12" | |
| - name: Install dependencies | |
| run: | | |
| IPFS_KIT_EXTRAS=dev,full ./scripts/zero_touch_install.sh | |
| - name: Run integration tests | |
| run: | | |
| if [ -d "tests/integration" ]; then | |
| pytest tests/integration/ -v --timeout=600 | |
| else | |
| echo "No integration tests found, skipping..." | |
| fi | |
| timeout-minutes: 15 | |
| docker-build: | |
| runs-on: ubuntu-latest | |
| needs: build | |
| if: github.ref == 'refs/heads/main' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v3 | |
| - name: Log in to Docker Hub | |
| if: github.event_name != 'pull_request' | |
| uses: docker/login-action@v3 | |
| with: | |
| username: ${{ secrets.DOCKER_USERNAME }} | |
| password: ${{ secrets.DOCKER_PASSWORD }} | |
| - name: Extract metadata | |
| id: meta | |
| uses: docker/metadata-action@v5 | |
| with: | |
| images: | | |
| ${{ github.repository }} | |
| tags: | | |
| type=ref,event=branch | |
| type=ref,event=pr | |
| type=sha,prefix={{branch}}- | |
| type=raw,value=latest,enable={{is_default_branch}} | |
| - name: Build and push Docker image | |
| uses: docker/build-push-action@v5 | |
| with: | |
| context: . | |
| file: ./deployment/docker/Dockerfile | |
| platforms: linux/amd64 | |
| push: ${{ github.event_name != 'pull_request' }} | |
| tags: ${{ steps.meta.outputs.tags }} | |
| labels: ${{ steps.meta.outputs.labels }} | |
| cache-from: type=gha | |
| cache-to: type=gha,mode=max |