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Description
The codebase contains some hard-coded references to files located on personal computers or in personal workspaces.
deploy.cfg:
kbase_file_cache=/Users/chenry/temp
...
mfatoolkitbin=/Users/chenry/code/MFAToolkit/bin/mfatoolkit
Note that the ontology_map_workspace must be set to a specific personal workspace for the tests to run.
kbaseenv.pm:
$config->{authentication}->{user_id} = "chenry";
scripts/func_build_metagenome_metabolic_model_test.pl:
gff_file => "/Users/chenry/workspace/PNNLSFA/SoilSFA_WA_nrKO.gff"
user-env.sh:
export KB_CLIENT_CONFIG=/Users/chenry/.kbase_config
The test data is all in personal workspaces at present but I have ignored that.
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