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Hard-coded references to personal files #95

@ialarmedalien

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@ialarmedalien

The codebase contains some hard-coded references to files located on personal computers or in personal workspaces.

deploy.cfg:

kbase_file_cache=/Users/chenry/temp

...

mfatoolkitbin=/Users/chenry/code/MFAToolkit/bin/mfatoolkit

Note that the ontology_map_workspace must be set to a specific personal workspace for the tests to run.

kbaseenv.pm:

		$config->{authentication}->{user_id} = "chenry";

scripts/func_build_metagenome_metabolic_model_test.pl:

	gff_file => "/Users/chenry/workspace/PNNLSFA/SoilSFA_WA_nrKO.gff"

user-env.sh:

export KB_CLIENT_CONFIG=/Users/chenry/.kbase_config

The test data is all in personal workspaces at present but I have ignored that.

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