Adding kwargs converters constructors

Author: ktsitsi

tiledb/bioimg/converters/base.py

@@ -284,10 +284,7 @@ def from_tiledb(
             output_config = config
 
         slide = TileDBOpenSlide(input_path, attr=attr, config=config)
-        ome = writer_kwargs.get("ome", None)
-        writer = cls._ImageWriterType(
-            destination_uri, logger, **({"ome": True if ome else None} or {})
-        )
+        writer = cls._ImageWriterType(destination_uri, logger, **(writer_kwargs or {}))
 
         with slide, writer:
             writer.write_group_metadata(slide.properties)

tiledb/bioimg/converters/ome_tiff.py

@@ -405,7 +405,9 @@ def chunk_iterator() -> Iterator[Tuple[Tuple[slice, ...], NDArray[Any]]]:
 
 
 class OMETiffWriter:
-    def __init__(self, output_path: str, logger: logging.Logger, ome: bool = True):
+    def __init__(
+        self, output_path: str, logger: logging.Logger, ome: bool = True, **kwargs: Any
+    ) -> None:
         self._logger = logger
         self._output_path = output_path
         self._ome = ome

tiledb/bioimg/converters/ome_zarr.py

@@ -216,7 +216,7 @@ def optimal_reader(
 
 
 class OMEZarrWriter:
-    def __init__(self, output_path: str, logger: logging.Logger):
+    def __init__(self, output_path: str, logger: logging.Logger, **kwargs: Any) -> None:
         """
         OME-Zarr image writer from TileDB
 

tiledb/bioimg/converters/png.py

@@ -199,7 +199,7 @@ def optimal_reader(
 
 class PNGWriter:
 
-    def __init__(self, output_path: str, logger: logging.Logger):
+    def __init__(self, output_path: str, logger: logging.Logger, **kwargs: Any) -> None:
         self._logger = logger
         self._output_path = output_path
         self._group_metadata: Dict[str, Any] = {}