The recipe of a resumed sample is not updated if parameters are modified

[raacampbell]

We now no longer create a new recipe file for each resume. However, the one recipe file that is present does not necessarily reflect what the acquisition is doing. For example: if we stop an acquisition early to change the number of sections, the new number of sections is not written to the existing recipe file.

The only place the recipe is written is at line 180 of BT.bake:

        % Now the recipe has been modified (at the start of BakingTray.bake) we can write the full thing to disk
        if sectionInd==1
            obj.recipe.writeFullRecipeForAcquisition(obj.sampleSavePath);
        end

[raacampbell]

See here: e817875
So maybe we can just delete the existing recipe?

[raacampbell]

Backing up existing recipes should fix this: bda986f

NOT TESTED YET!