attributions.md

Technical Attributions

Shariant, RunX1, SA Pathology VariantGrid and variantgrid.com are built upon VariantGrid technology.

Genetic/Medical Databases

Sources used for VariantGrid annotations:

• Ensembl Variant Effect Predictor (VEP)

• 1000 Genomes

• cadd

• ClinVar

• cosmic

• dbsnp

• Ensembl

• exac

• Exome Sequencing Project (ESP)

• fathmm

• gerp

• Human Protein Atlas

• Human Phenotype Ontology

• pfam

• phylop

• UCSC

Literature References

Sources used for summaries of cited literature:

• NCBI Bookshelf
• PubMed
• PubMed Central

Technical architecture

VariantGrid is open source, written in Python 3, and depends on many libraries. The main components are:

• Django
• Postgres
• RabbitMQ
• Redis
• Nginx
• Guinicorn

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