I can not get my result for a peptiderive submittion

[emreuyguc04-bit]

Hello, I am trying to submit 2 of my PDB files to peptiderive and get results. I got results for my other 2 but I can not get my results for these. I keep getting this message. First I got the File could not be parsed error which got me thinking if I did not specify my chains correctly. Afterwards I got this message. "Error 500 We're sorry but we weren't able to process this request." Can someone help me? I have been trying for about a week.

[lyskov]

Could you please share the input data that gives you trouble so I can redirect it to ppl who might be able to help? Thanks,

[emreuyguc04-bit]

Hello, thank you for responding. The PDB IDs are 6XI7 and 6XGU. For some reason it does not let me add the PDB files to GitHub.

[orafurman]

This seems to be a general failure to fetch a file from the pdb. Try uploading the pdb file directly while we fix this. Ora Prof. Ora Schueler-Furman Vice Dean for Academic Appointments and Promotions, Faculty of Medicine Center for Computational Medicine Departments of Quantitative Molecular Medicine (QMM) & Microbiology and Molecular Genetics, IMRIC The Hebrew University, Hadassah Medical School POB 12272, Jerusalem 91120 Israel Tel: 972-2-675-7094 FAX: 972-2-675-7308 Furman lab site: www.cs.huji.ac.il/~fora

…

On 6 Apr 2026, at 12:37, emreuyguc04-bit ***@***.***> wrote: Hello, thank you for responding. The PDB IDs are 6XI7 and 6XGU. For some reason it does not let me add the PDB files to GitHub. — Reply to this email directly, view it on GitHub <#642 (reply in thread)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABQYJDXQ7A2BSZYFQQNYDXL4UN3F5AVCNFSM6AAAAACXK67OVSVHI2DSMVQWIX3LMV43URDJONRXK43TNFXW4Q3PNVWWK3TUHMYTMNBWGI2TINQ>. You are receiving this because you are subscribed to this thread.

[emreuyguc04-bit]

Yes, I did upload the PDB file directly. It did not change anything I still got this message. "Error 500 We're sorry but we weren't able to process this request."

[orafurman]

I looked into it, and unfortunately, there is a technical problem that we need to fix. In the meanwhile, I attach the results for your PDBs (run locally):  Let me know if you need any other peptiderive runs and we will run them locally for you. Ora

On 6 Apr 2026, at 12:37, emreuyguc04-bit ***@***.***> wrote: Hello, thank you for responding. The PDB IDs are 6XI7 and 6XGU. For some reason it does not let me add the PDB files to GitHub. — Reply to this email directly, view it on GitHub <#642 (reply in thread)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABQYJDXQ7A2BSZYFQQNYDXL4UN3F5AVCNFSM6AAAAACXK67OVSVHI2DSMVQWIX3LMV43URDJONRXK43TNFXW4Q3PNVWWK3TUHMYTMNBWGI2TINQ>. You are receiving this because you are subscribed to this thread.

# Peptiderive report file 6xgu_0001 - Chains: 6 - Rosetta version: devel 2025.06+main.029c6a159b commit 029c6a1 from https://github.com/RosettaCommons/rosetta - (*) in the 'Relative interface score (%)' column means positive values were calculated for these entries, indicating unfavorable interactions - (**) in the 'Cyclized interface score' column means that a cyclized model was not constructed for this cyclizable peptide, since its energy contribution (in its linear form) was not significant - Disulfide-cyclized peptide models have additional N- and C-terminal cysteine residues, not shown in the 'Sequence' column ## Best linear peptides for all chain pairs | Receptor | Partner | Peptide length | Position | Interface score | Relative interface score (%) | Sequence | |----------|---------|----------------|----------|-----------------|------------------------------|----------------------| | A | A | 18 | 91 | -22.126 | 70.46 | EDIHHYREQIKRVKDSED | | A | A | 17 | 91 | -22.126 | 70.46 | EDIHHYREQIKRVKDSE | | A | A | 16 | 79 | -23.059 | 73.43 | LCVFAINNTKSFEDIH | | A | A | 15 | 80 | -23.059 | 73.43 | CVFAINNTKSFEDIH | | A | A | 14 | 79 | -23.059 | 73.43 | LCVFAINNTKSFED | | A | A | 13 | 91 | -22.126 | 70.46 | EDIHHYREQIKRV | | A | A | 12 | 91 | -22.126 | 70.46 | EDIHHYREQIKR | | A | A | 11 | 84 | -23.059 | 73.43 | INNTKSFEDIH | | A | A | 10 | 83 | -23.059 | 73.43 | AINNTKSFED | | A | A | 9 | 84 | -23.059 | 73.43 | INNTKSFED | | A | A | 8 | 86 | -23.059 | 73.43 | NTKSFEDI | | A | A | 7 | 86 | -23.059 | 73.43 | NTKSFED | | A | A | 6 | 89 | -23.092 | 73.53 | SFEDIH | | A | A | 5 | 90 | -23.092 | 73.53 | FEDIH | | A | A | 4 | 91 | -23.092 | 73.53 | EDIH | | A | A | 3 | 90 | -23.092 | 73.53 | FED | | A | B | 18 | 1 | -28.783 | 38.93 | SNTIRVFLPNKQRTVVNV | | A | B | 17 | 1 | -28.783 | 38.93 | SNTIRVFLPNKQRTVVN | | A | B | 16 | 2 | -28.687 | 38.79 | NTIRVFLPNKQRTVVN | | A | B | 15 | 3 | -28.685 | 38.79 | TIRVFLPNKQRTVVN | | A | B | 14 | 3 | -28.085 | 37.98 | TIRVFLPNKQRTVV | | A | B | 13 | 5 | -27.584 | 37.30 | RVFLPNKQRTVVN | | A | B | 12 | 5 | -26.984 | 36.49 | RVFLPNKQRTVV | | A | B | 11 | 5 | -25.916 | 35.05 | RVFLPNKQRTV | | A | B | 10 | 8 | -24.273 | 32.83 | LPNKQRTVVN | | A | B | 9 | 9 | -24.185 | 32.71 | PNKQRTVVN | | A | B | 8 | 10 | -24.065 | 32.54 | NKQRTVVN | | A | B | 7 | 10 | -23.465 | 31.73 | NKQRTVV | | A | B | 6 | 10 | -22.396 | 30.29 | NKQRTV | | A | B | 5 | 12 | -21.192 | 28.66 | QRTVV | | A | B | 4 | 12 | -20.124 | 27.21 | QRTV | | A | B | 3 | 13 | -14.481 | 19.58 | RTV | | B | A | 18 | 31 | -62.791 | 84.92 | EYDPTIEDSYRKQVVIDG | | B | A | 17 | 33 | -61.317 | 82.92 | DPTIEDSYRKQVVIDGE | | B | A | 16 | 33 | -60.587 | 81.94 | DPTIEDSYRKQVVIDG | | B | A | 15 | 36 | -58.738 | 79.43 | IEDSYRKQVVIDGET | | B | A | 14 | 36 | -57.532 | 77.80 | IEDSYRKQVVIDGE | | B | A | 13 | 36 | -56.802 | 76.82 | IEDSYRKQVVIDG | | B | A | 12 | 37 | -50.305 | 68.03 | EDSYRKQVVIDG | | B | A | 11 | 35 | -49.135 | 66.45 | TIEDSYRKQVV | | B | A | 10 | 36 | -49.212 | 66.55 | IEDSYRKQVV | | B | A | 9 | 37 | -42.715 | 57.76 | EDSYRKQVV | | B | A | 8 | 36 | -40.554 | 54.84 | IEDSYRKQ | | B | A | 7 | 36 | -37.768 | 51.08 | IEDSYRK | | B | A | 6 | 36 | -34.416 | 46.54 | IEDSYR | | B | A | 5 | 36 | -27.923 | 37.76 | IEDSY | | B | A | 4 | 36 | -25.121 | 33.97 | IEDS | | B | A | 3 | 36 | -19.529 | 26.41 | IED | | B | A | 18 | 39 | -0.736 | 99.41 | SYRKQVVIDGETCLLDIL | | B | A | 17 | 39 | -0.736 | 99.41 | SYRKQVVIDGETCLLDI | | B | A | 16 | 40 | -0.736 | 99.41 | YRKQVVIDGETCLLDI | | B | A | 15 | 40 | -0.736 | 99.41 | YRKQVVIDGETCLLD | | B | A | 14 | 39 | -0.736 | 99.41 | SYRKQVVIDGETCL | | B | A | 13 | 40 | -0.736 | 99.41 | YRKQVVIDGETCL | | B | A | 12 | 39 | -0.700 | 94.56 | SYRKQVVIDGET | | B | A | 11 | 39 | -0.700 | 94.56 | SYRKQVVIDGE | | B | A | 10 | 40 | -0.700 | 94.56 | YRKQVVIDGE | | B | A | 9 | 34 | -0.702 | 94.83 | PTIEDSYRK | | B | A | 8 | 35 | -0.702 | 94.83 | TIEDSYRK | | B | A | 7 | 39 | -0.700 | 94.56 | SYRKQVV | | B | A | 6 | 37 | -0.702 | 94.83 | EDSYRK | | B | A | 5 | 40 | -0.700 | 94.56 | YRKQV | | B | A | 4 | 39 | -0.702 | 94.83 | SYRK | | B | A | 3 | 40 | -0.702 | 94.83 | YRK | | A | B | 18 | 19 | -0.455 | 100.00 | RNGMSLHDCLMKALKVRG | | A | B | 17 | 19 | -0.455 | 100.00 | RNGMSLHDCLMKALKVR | | A | B | 16 | 18 | -0.455 | 100.00 | VRNGMSLHDCLMKALK | | A | B | 15 | 19 | -0.455 | 100.00 | RNGMSLHDCLMKALK | | A | B | 14 | 17 | -0.455 | 100.00 | NVRNGMSLHDCLMK | | A | B | 13 | 19 | -0.455 | 100.00 | RNGMSLHDCLMKA | | A | B | 12 | 19 | -0.455 | 100.00 | RNGMSLHDCLMK | | A | B | 11 | 21 | -0.455 | 100.00 | GMSLHDCLMKA | | A | B | 10 | 22 | -0.455 | 100.00 | MSLHDCLMKA | | A | B | 9 | 22 | -0.455 | 100.00 | MSLHDCLMK | | A | B | 8 | 30 | -0.447 | 98.17 | KALKVRGL | | A | B | 7 | 30 | -0.447 | 98.17 | KALKVRG | | A | B | 6 | 30 | -0.447 | 98.17 | KALKVR | | A | B | 5 | 29 | -0.447 | 98.17 | MKALK | | A | B | 4 | 27 | -0.447 | 98.17 | CLMK | | A | B | 3 | 29 | -0.447 | 98.17 | MKA | | B | B | 18 | 109 | -7.682 | 99.95 | FRCQTCGYKFHEHCSTKV | | B | B | 17 | 110 | -7.682 | 99.95 | RCQTCGYKFHEHCSTKV | | B | B | 16 | 110 | -7.682 | 99.95 | RCQTCGYKFHEHCSTK | | B | B | 15 | 116 | -7.710 | 100.31 | YKFHEHCSTKVPTMC | | B | B | 14 | 117 | -7.976 | 103.77 | KFHEHCSTKVPTMC | | B | B | 13 | 118 | -7.965 | 103.62 | FHEHCSTKVPTMC | | B | B | 12 | 111 | -7.559 | 98.34 | CQTCGYKFHEHC | | B | B | 11 | 109 | -6.535 | 85.02 | FRCQTCGYKFH | | B | B | 10 | 110 | -6.535 | 85.02 | RCQTCGYKFH | | B | B | 9 | 117 | -6.441 | 83.79 | KFHEHCSTK | | B | B | 8 | 117 | -6.441 | 83.79 | KFHEHCST | | B | B | 7 | 79 | -7.450 | 96.92 | HVPLTTH | | B | B | 6 | 80 | -7.450 | 96.92 | VPLTTH | | B | B | 5 | 81 | -7.450 | 96.92 | PLTTH | | B | B | 4 | 82 | -7.450 | 96.92 | LTTH | | B | B | 3 | 83 | -7.450 | 96.92 | TTH | | B | B | 18 | 77 | -1.287 | 35.90 | LDHVPLTTHNFARKTFLK | | B | B | 17 | 118 | -2.298 | 64.10 | FHEHCSTKVPTMCVDWS | | B | B | 16 | 117 | -2.694 | 75.13 | KFHEHCSTKVPTMCVD | | B | B | 15 | 78 | -1.287 | 35.90 | DHVPLTTHNFARKTF | | B | B | 14 | 72 | -1.287 | 35.90 | LQVDFLDHVPLTTH | | B | B | 13 | 72 | -1.287 | 35.90 | LQVDFLDHVPLTT | | B | B | 12 | 121 | -2.694 | 75.13 | HCSTKVPTMCVD | | B | B | 11 | 78 | -1.287 | 35.90 | DHVPLTTHNFA | | B | B | 10 | 124 | -2.446 | 68.22 | TKVPTMCVDW | | B | B | 9 | 76 | -1.287 | 35.90 | FLDHVPLTT | | B | B | 8 | 125 | -2.694 | 75.13 | KVPTMCVD | | B | B | 7 | 126 | -2.694 | 75.13 | VPTMCVD | | B | B | 6 | 127 | -2.694 | 75.13 | PTMCVD | | B | B | 5 | 129 | -2.446 | 68.22 | MCVDW | | B | B | 4 | 129 | -2.694 | 75.13 | MCVD | | B | B | 3 | 130 | -2.694 | 75.13 | CVD | | B | B | 18 | 9 | -0.650 | 26.60 | PNKQRTVVNVRNGMSLHD | | B | B | 17 | 9 | -0.650 | 26.60 | PNKQRTVVNVRNGMSLH | | B | B | 16 | 118 | -1.122 | 45.95 | FHEHCSTKVPTMCVDW | | B | B | 15 | 118 | -1.122 | 45.95 | FHEHCSTKVPTMCVD | | B | B | 14 | 116 | -1.126 | 46.10 | YKFHEHCSTKVPTM | | B | B | 13 | 9 | -0.650 | 26.60 | PNKQRTVVNVRNG | | B | B | 12 | 123 | -1.122 | 45.95 | STKVPTMCVDWS | | B | B | 11 | 1 | -1.195 | 48.92 | SNTIRVFLPNK | | B | B | 10 | 1 | -1.442 | 59.06 | SNTIRVFLPN | | B | B | 9 | 2 | -1.442 | 59.06 | NTIRVFLPN | | B | B | 8 | 127 | -1.122 | 45.95 | PTMCVDWS | | B | B | 7 | 123 | -1.126 | 46.10 | STKVPTM | | B | B | 6 | 124 | -1.126 | 46.10 | TKVPTM | | B | B | 5 | 6 | -1.442 | 59.06 | VFLPN | | B | B | 4 | 126 | -1.126 | 46.10 | VPTM | | B | B | 3 | 8 | -1.442 | 59.06 | LPN | ## Best disulfide cyclizable peptides for all chain pairs | Receptor | Partner | Peptide length | Position | Interface score | Relative interface score (%) | Extra info | Cyclized interface score | Sequence | |----------|---------|----------------|----------|-----------------|------------------------------|----------------|--------------------------|----------------------| | A | A | 15 | 25 | -11.462 | 36.50 | A_24-40 | -12.395 | CQNHFVDEYDPTIEDSC | | A | A | 12 | 143 | -1.410 | 4.49 | | ** | ETSAKTRQGVDD | | A | A | 6 | 145 | -1.822 | 5.80 | | ** | SAKTRQ | | A | A | 4 | 146 | -1.798 | 5.73 | | ** | AKTR | | A | A | 3 | 16 | -4.168 | 13.27 | | ** | KSA | | A | B | 16 | 15 | -13.064 | 17.67 | | ** | VVNVRNGMSLHDCLMK | | A | B | 10 | 109 | -4.881 | 6.60 | | ** | FRCQTCGYKF | | A | B | 5 | 8 | -6.060 | 8.20 | | ** | LPNKQ | | A | B | 4 | 33 | -12.690 | 17.16 | | ** | KVRG | | A | B | 3 | 119 | -5.147 | 6.96 | | ** | HEH | | B | A | 18 | 39 | -35.966 | 48.64 | | ** | CSYRKQVVIDGETCLLDILC | | B | A | 15 | 25 | -35.701 | 48.28 | | ** | CQNHFVDEYDPTIEDSC | | B | A | 14 | 41 | -28.480 | 38.51 | A_40-55 | -30.446 | CRKQVVIDGETCLLDC | | B | A | 4 | 60 | -0.132 | 0.18 | | ** | GREE | | B | A | 18 | 39 | -0.736 | 99.41 | | ** | CSYRKQVVIDGETCLLDILC | | B | A | 14 | 41 | -0.587 | 79.33 | A_40-55 | -0.630 | CRKQVVIDGETCLLDC | | B | B | 11 | 109 | -6.535 | 85.02 | | ** | CFRCQTCGYKFHC | | B | B | 10 | 109 | -2.620 | 34.08 | | ** | FRCQTCGYKF | | B | B | 8 | 97 | -0.741 | 9.64 | | ** | FCDICQKF | | B | B | 6 | 111 | -1.119 | 14.55 | | ** | CQTCGY | | B | B | 3 | 119 | -3.566 | 46.40 | | ** | CHEHC | | B | B | 5 | 8 | -0.649 | 26.57 | | ** | LPNKQ | | B | B | 4 | 33 | -0.310 | 12.70 | | ** | KVRG | | B | B | 3 | 9 | -1.195 | 48.95 | | ** | CPNKC | ## Best end-to-end cyclizable peptides for all chain pairs | Receptor | Partner | Peptide length | Position | Interface score | Relative interface score (%) | Extra info | Cyclized interface score | Sequence | |----------|---------|----------------|----------|-----------------|------------------------------|----------------|--------------------------|----------------------| | A | B | 13 | 4 | -26.984 | 36.49 | B_4-16 | -19.491 | IRVFLPNKQRTVV | | B | A | 16 | 40 | -31.753 | 42.94 | A_40-55 | -10.688 | YRKQVVIDGETCLLDI | | B | A | 16 | 40 | -0.736 | 99.41 | A_40-55 | -0.220 | YRKQVVIDGETCLLDI | ## All linear peptides ### Receptor= A Partner= A Peptide_length= 3 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| ### Receptor= A Partner= A Peptide_length= 18 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| | 1 | -4.503 | 14.34 | | 2 | -4.920 | 15.67 | | 3 | -4.920 | 15.67 | | 4 | -4.921 | 15.67 | | 5 | -4.921 | 15.67 | | 6 | -4.921 | 15.67 | | 7 | -4.921 | 15.67 | | 8 | -4.921 | 15.67 | | 9 | -4.921 | 15.67 | | 10 | -4.921 | 15.67 | | 11 | -7.831 | 24.94 | | 12 | -12.901 | 41.08 | | 13 | -10.221 | 32.55 | | 14 | -9.216 | 29.35 | | 15 | -9.233 | 29.40 | | 16 | -8.522 | 27.14 | | 17 | -11.157 | 35.53 | | 18 | -12.853 | 40.93 | | 19 | -11.793 | 37.55 | | 20 | -11.463 | 36.50 | | 21 | -11.463 | 36.50 | | 22 | -11.462 | 36.50 | | 23 | -11.462 | 36.50 | | 24 | -11.462 | 36.50 | | 25 | -11.462 | 36.50 | | 26 | -11.462 | 36.50 | | 27 | -11.462 | 36.50 | | 28 | -11.462 | 36.50 | | 29 | -8.389 | 26.71 | | 30 | -3.833 | 12.21 | | 31 | -3.889 | 12.38 | | 32 | -5.353 | 17.05 | | 33 | -5.052 | 16.09 | | 34 | -4.145 | 13.20 | | 35 | -4.167 | 13.27 | | 36 | 0.000 | * | | 55 | -8.375 | 26.67 | | 56 | -8.375 | 26.67 | | 57 | -8.375 | 26.67 | | 58 | -1.473 | 4.69 | | 59 | -0.061 | 0.19 | | 60 | -0.114 | 0.36 | | 61 | 0.052 | * | | 80 | -22.093 | 70.35 | | 81 | -22.093 | 70.35 | | 82 | -22.093 | 70.35 | | 83 | -22.093 | 70.35 | | 84 | -22.093 | 70.35 | | 85 | -22.093 | 70.35 | | 86 | -22.093 | 70.35 | | 87 | -22.093 | 70.35 | | 88 | -22.093 | 70.35 | | 89 | -22.126 | 70.46 | | 90 | -22.126 | 70.46 | | 91 | -22.126 | 70.46 | | 92 | -21.745 | 69.24 | | 93 | 0.965 | * | | 94 | 0.965 | * | | 95 | 0.965 | * | | 114 | -14.959 | 47.63 | | 115 | -14.959 | 47.63 | | 116 | -14.963 | 47.65 | | 117 | -14.404 | 45.87 | | 118 | -11.539 | 36.74 | | 119 | -11.318 | 36.04 | | 120 | -0.164 | 0.52 | | 139 | -1.410 | 4.49 | | 140 | -1.410 | 4.49 | | 141 | -1.410 | 4.49 | | 142 | -1.410 | 4.49 | | 143 | -1.410 | 4.49 | | 144 | -1.410 | 4.49 | | 145 | -1.822 | 5.80 | | 146 | -1.798 | 5.73 | | 147 | 0.675 | * | | 148 | -0.014 | 0.04 | --- ### Receptor= A Partner= A Peptide_length= 17 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| | 1 | 0.030 | * | | 2 | -4.503 | 14.34 | | 3 | -4.920 | 15.67 | | 4 | -4.920 | 15.67 | | 5 | -4.921 | 15.67 | | 6 | -4.921 | 15.67 | | 7 | -4.921 | 15.67 | | 8 | -4.921 | 15.67 | | 9 | -4.921 | 15.67 | | 10 | -4.921 | 15.67 | | 11 | -4.921 | 15.67 | | 12 | -8.769 | 27.92 | | 13 | -10.643 | 33.89 | | 14 | -9.884 | 31.47 | | 15 | -9.781 | 31.15 | | 16 | -9.990 | 31.81 | | 17 | -9.240 | 29.42 | | 18 | -7.240 | 23.05 | | 19 | -11.798 | 37.57 | | 20 | -11.463 | 36.50 | | 21 | -11.463 | 36.50 | | 22 | -11.462 | 36.50 | | 23 | -11.462 | 36.50 | | 24 | -11.462 | 36.50 | | 25 | -11.462 | 36.50 | | 26 | -11.462 | 36.50 | | 27 | -11.462 | 36.50 | | 28 | -11.462 | 36.50 | | 29 | -8.389 | 26.71 | | 30 | -3.833 | 12.21 | | 31 | -3.889 | 12.38 | | 32 | -5.353 | 17.05 | | 33 | -5.052 | 16.09 | | 34 | -4.145 | 13.20 | | 35 | -4.167 | 13.27 | | 36 | 0.000 | * | | 54 | -8.375 | 26.67 | | 55 | -8.375 | 26.67 | | 56 | -8.375 | 26.67 | | 57 | -8.375 | 26.67 | | 58 | -1.473 | 4.69 | | 59 | -0.061 | 0.19 | | 60 | -0.114 | 0.36 | | 61 | 0.052 | * | | 79 | -22.093 | 70.35 | | 80 | -22.093 | 70.35 | | 81 | -22.093 | 70.35 | | 82 | -22.093 | 70.35 | | 83 | -22.093 | 70.35 | | 84 | -22.093 | 70.35 | | 85 | -22.093 | 70.35 | | 86 | -22.093 | 70.35 | | 87 | -22.093 | 70.35 | | 88 | -22.093 | 70.35 | | 89 | -22.126 | 70.46 | | 90 | -22.126 | 70.46 | | 91 | -22.126 | 70.46 | | 92 | -21.745 | 69.24 | | 93 | 0.965 | * | | 94 | 0.965 | * | | 95 | 0.965 | * | | 113 | -14.959 | 47.63 | | 114 | -14.959 | 47.63 | | 115 | -14.959 | 47.63 | | 116 | -14.963 | 47.65 | | 117 | -14.404 | 45.87 | | 118 | -11.539 | 36.74 | | 119 | -11.318 | 36.04 | | 120 | -0.164 | 0.52 | | 138 | -1.410 | 4.49 | | 139 | -1.410 | 4.49 | | 140 | -1.410 | 4.49 | | 141 | -1.410 | 4.49 | | 142 | -1.410 | 4.49 | | 143 | -1.410 | 4.49 | | 144 | -1.410 | 4.49 | | 145 | -1.822 | 5.80 | | 146 | -1.798 | 5.73 | | 147 | 0.675 | * | | 148 | -0.014 | 0.04 | --- ### Receptor= A Partner= A Peptide_length= 16 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| | 1 | 1.841 | * | | 2 | 0.030 | * | | 3 | -4.503 | 14.34 | | 4 | -4.920 | 15.67 | | 5 | -4.920 | 15.67 | | 6 | -4.921 | 15.67 | | 7 | -4.921 | 15.67 | | 8 | -4.921 | 15.67 | | 9 | -4.921 | 15.67 | | 10 | -4.921 | 15.67 | | 11 | -4.921 | 15.67 | | 12 | -5.859 | 18.66 | | 13 | -6.511 | 20.73 | | 14 | -10.306 | 32.82 | | 15 | -10.449 | 33.27 | | 16 | -10.539 | 33.56 | | 17 | -10.708 | 34.10 | | 18 | -5.323 | 16.95 | | 19 | -6.185 | 19.70 | | 20 | -11.468 | 36.52 | | 21 | -11.463 | 36.50 | | 22 | -11.462 | 36.50 | | 23 | -11.462 | 36.50 | | 24 | -11.462 | 36.50 | | 25 | -11.462 | 36.50 | | 26 | -11.462 | 36.50 | | 27 | -11.462 | 36.50 | | 28 | -11.462 | 36.50 | | 29 | -8.389 | 26.71 | | 30 | -3.833 | 12.21 | | 31 | -3.889 | 12.38 | | 32 | -5.353 | 17.05 | | 33 | -5.052 | 16.09 | | 34 | -4.145 | 13.20 | | 35 | -4.167 | 13.27 | | 36 | 0.000 | * | | 53 | -8.375 | 26.67 | | 54 | -8.375 | 26.67 | | 55 | -8.375 | 26.67 | | 56 | -8.375 | 26.67 | | 57 | -8.375 | 26.67 | | 58 | -1.473 | 4.69 | | 59 | -0.061 | 0.19 | | 60 | -0.114 | 0.36 | | 61 | 0.052 | * | | 78 | -23.059 | 73.43 | | 79 | -23.059 | 73.43 | | 80 | -22.093 | 70.35 | | 81 | -22.093 | 70.35 | | 82 | -22.093 | 70.35 | | 83 | -22.093 | 70.35 | | 84 | -22.093 | 70.35 | | 85 | -22.093 | 70.35 | | 86 | -22.093 | 70.35 | | 87 | -22.093 | 70.35 | | 88 | -22.093 | 70.35 | | 89 | -22.126 | 70.46 | | 90 | -22.126 | 70.46 | | 91 | -22.126 | 70.46 | | 92 | -21.745 | 69.24 | | 93 | 0.965 | * | | 94 | 0.965 | * | | 95 | 0.965 | * | | 112 | -14.959 | 47.63 | | 113 | -14.959 | 47.63 | | 114 | -14.959 | 47.63 | | 115 | -14.959 | 47.63 | | 116 | -14.963 | 47.65 | | 117 | -14.404 | 45.87 | | 118 | -11.539 | 36.74 | | 119 | -11.318 | 36.04 | | 120 | -0.164 | 0.52 | | 137 | -1.410 | 4.49 | | 138 | -1.410 | 4.49 | | 139 | -1.410 | 4.49 | | 140 | -1.410 | 4.49 | | 141 | -1.410 | 4.49 | | 142 | -1.410 | 4.49 | | 143 | -1.410 | 4.49 | | 144 | -1.410 | 4.49 | | 145 | -1.822 | 5.80 | | 146 | -1.798 | 5.73 | | 147 | 0.675 | * | | 148 | -0.014 | 0.04 | --- ### Receptor= A Partner= A Peptide_length= 15 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| | 1 | 2.188 | * | | 2 | 1.841 | * | | 3 | 0.030 | * | | 4 | -4.503 | 14.34 | | 5 | -4.920 | 15.67 | | 6 | -4.920 | 15.67 | | 7 | -4.921 | 15.67 | | 8 | -4.921 | 15.67 | | 9 | -4.921 | 15.67 | | 10 | -4.921 | 15.67 | | 11 | -4.921 | 15.67 | | 12 | -5.859 | 18.66 | | 13 | -3.600 | 11.46 | | 14 | -6.174 | 19.66 | | 15 | -10.871 | 34.62 | | 16 | -11.206 | 35.68 | | 17 | -11.257 | 35.84 | | 18 | -6.791 | 21.63 | | 19 | -4.268 | 13.59 | | 20 | -5.855 | 18.64 | | 21 | -11.468 | 36.52 | | 22 | -11.462 | 36.50 | | 23 | -11.462 | 36.50 | | 24 | -11.462 | 36.50 | | 25 | -11.462 | 36.50 | | 26 | -11.462 | 36.50 | | 27 | -11.462 | 36.50 | | 28 | -11.462 | 36.50 | | 29 | -8.389 | 26.71 | | 30 | -3.833 | 12.21 | | 31 | -3.889 | 12.38 | | 32 | -5.353 | 17.05 | | 33 | -5.052 | 16.09 | | 34 | -4.145 | 13.20 | | 35 | -4.167 | 13.27 | | 36 | 0.000 | * | | 52 | -8.375 | 26.67 | | 53 | -8.375 | 26.67 | | 54 | -8.375 | 26.67 | | 55 | -8.375 | 26.67 | | 56 | -8.375 | 26.67 | | 57 | -8.375 | 26.67 | | 58 | -1.473 | 4.69 | | 59 | -0.061 | 0.19 | | 60 | -0.114 | 0.36 | | 61 | 0.052 | * | | 77 | 0.031 | * | | 78 | -23.059 | 73.43 | | 79 | -23.059 | 73.43 | | 80 | -23.059 | 73.43 | | 81 | -22.093 | 70.35 | | 82 | -22.093 | 70.35 | | 83 | -22.093 | 70.35 | | 84 | -22.093 | 70.35 | | 85 | -22.093 | 70.35 | | 86 | -22.093 | 70.35 | | 87 | -22.093 | 70.35 | | 88 | -22.093 | 70.35 | | 89 | -22.126 | 70.46 | | 90 | -22.126 | 70.46 | | 91 | -22.126 | 70.46 | | 92 | -21.745 | 69.24 | | 93 | 0.965 | * | | 94 | 0.965 | * | | 95 | 0.965 | * | | 111 | -14.959 | 47.63 | | 112 | -14.959 | 47.63 | | 113 | -14.959 | 47.63 | | 114 | -14.959 | 47.63 | | 115 | -14.959 | 47.63 | | 116 | -14.963 | 47.65 | | 117 | -14.404 | 45.87 | | 118 | -11.539 | 36.74 | | 119 | -11.318 | 36.04 | | 120 | -0.164 | 0.52 | | 136 | -1.410 | 4.49 | | 137 | -1.410 | 4.49 | | 138 | -1.410 | 4.49 | | 139 | -1.410 | 4.49 | | 140 | -1.410 | 4.49 | | 141 | -1.410 | 4.49 | | 142 | -1.410 | 4.49 | | 143 | -1.410 | 4.49 | | 144 | -1.410 | 4.49 | | 145 | -1.822 | 5.80 | | 146 | -1.798 | 5.73 | | 147 | 0.675 | * | | 148 | -0.014 | 0.04 | --- ### Receptor= A Partner= A Peptide_length= 14 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| | 1 | -0.126 | 0.40 | | 2 | 2.188 | * | | 3 | 1.841 | * | | 4 | 0.030 | * | | 5 | -4.503 | 14.34 | | 6 | -4.920 | 15.67 | | 7 | -4.920 | 15.67 | | 8 | -4.921 | 15.67 | | 9 | -4.921 | 15.67 | | 10 | -4.921 | 15.67 | | 11 | -4.921 | 15.67 | | 12 | -5.859 | 18.66 | | 13 | -3.600 | 11.46 | | 14 | -3.263 | 10.39 | | 15 | -6.739 | 21.46 | | 16 | -11.628 | 37.03 | | 17 | -11.924 | 37.97 | | 18 | -7.339 | 23.37 | | 19 | -5.736 | 18.27 | | 20 | -3.938 | 12.54 | | 21 | -5.855 | 18.64 | | 22 | -11.467 | 36.51 | | 23 | -11.462 | 36.50 | | 24 | -11.462 | 36.50 | | 25 | -11.462 | 36.50 | | 26 | -11.462 | 36.50 | | 27 | -11.462 | 36.50 | | 28 | -11.462 | 36.50 | | 29 | -8.389 | 26.71 | | 30 | -3.833 | 12.21 | | 31 | -3.889 | 12.38 | | 32 | -5.353 | 17.05 | | 33 | -5.052 | 16.09 | | 34 | -4.145 | 13.20 | | 35 | -4.167 | 13.27 | | 36 | 0.000 | * | | 51 | -8.375 | 26.67 | | 52 | -8.375 | 26.67 | | 53 | -8.375 | 26.67 | | 54 | -8.375 | 26.67 | | 55 | -8.375 | 26.67 | | 56 | -8.375 | 26.67 | | 57 | -8.375 | 26.67 | | 58 | -1.473 | 4.69 | | 59 | -0.061 | 0.19 | | 60 | -0.114 | 0.36 | | 61 | 0.052 | * | | 76 | 0.033 | * | | 77 | 0.033 | * | | 78 | 0.031 | * | | 79 | -23.059 | 73.43 | | 80 | -23.059 | 73.43 | | 81 | -23.059 | 73.43 | | 82 | -22.093 | 70.35 | | 83 | -22.093 | 70.35 | | 84 | -22.093 | 70.35 | | 85 | -22.093 | 70.35 | | 86 | -22.093 | 70.35 | | 87 | -22.093 | 70.35 | | 88 | -22.093 | 70.35 | | 89 | -22.126 | 70.46 | | 90 | -22.126 | 70.46 | | 91 | -22.126 | 70.46 | | 92 | -21.745 | 69.24 | | 93 | 0.965 | * | | 94 | 0.965 | * | | 95 | 0.965 | * | | 110 | -14.959 | 47.63 | | 111 | -14.959 | 47.63 | | 112 | -14.959 | 47.63 | | 113 | -14.959 | 47.63 | | 114 | -14.959 | 47.63 | | 115 | -14.959 | 47.63 | | 116 | -14.963 | 47.65 | | 117 | -14.404 | 45.87 | | 118 | -11.539 | 36.74 | | 119 | -11.318 | 36.04 | | 120 | -0.164 | 0.52 | | 135 | -1.410 | 4.49 | | 136 | -1.410 | 4.49 | | 137 | -1.410 | 4.49 | | 138 | -1.410 | 4.49 | | 139 | -1.410 | 4.49 | | 140 | -1.410 | 4.49 | | 141 | -1.410 | 4.49 | | 142 | -1.410 | 4.49 | | 143 | -1.410 | 4.49 | | 144 | -1.410 | 4.49 | | 145 | -1.822 | 5.80 | | 146 | -1.798 | 5.73 | | 147 | 0.675 | * | | 148 | -0.014 | 0.04 | --- ### Receptor= A Partner= A Peptide_length= 13 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| | 1 | -0.389 | 1.24 | | 2 | -0.126 | 0.40 | | 3 | 2.188 | * | | 4 | 1.841 | * | | 5 | 0.030 | * | | 6 | -4.503 | 14.34 | | 7 | -4.920 | 15.67 | | 8 | -4.920 | 15.67 | | 9 | -4.921 | 15.67 | | 10 | -4.921 | 15.67 | | 11 | -4.921 | 15.67 | | 12 | -5.859 | 18.66 | | 13 | -3.600 | 11.46 | | 14 | -3.263 | 10.39 | | 15 | -3.828 | 12.19 | | 16 | -7.496 | 23.87 | | 17 | -12.346 | 39.31 | | 18 | -8.007 | 25.50 | | 19 | -6.284 | 20.01 | | 20 | -5.406 | 17.21 | | 21 | -3.938 | 12.54 | | 22 | -5.854 | 18.64 | | 23 | -11.467 | 36.51 | | 24 | -11.462 | 36.50 | | 25 | -11.462 | 36.50 | | 26 | -11.462 | 36.50 | | 27 | -11.462 | 36.50 | | 28 | -11.462 | 36.50 | | 29 | -8.389 | 26.71 | | 30 | -3.833 | 12.21 | | 31 | -3.889 | 12.38 | | 32 | -5.353 | 17.05 | | 33 | -5.052 | 16.09 | | 34 | -4.145 | 13.20 | | 35 | -4.167 | 13.27 | | 36 | 0.000 | * | | 50 | -8.375 | 26.67 | | 51 | -8.375 | 26.67 | | 52 | -8.375 | 26.67 | | 53 | -8.375 | 26.67 | | 54 | -8.375 | 26.67 | | 55 | -8.375 | 26.67 | | 56 | -8.375 | 26.67 | | 57 | -8.375 | 26.67 | | 58 | -1.473 | 4.69 | | 59 | -0.061 | 0.19 | | 60 | -0.114 | 0.36 | | 61 | 0.052 | * | | 88 | -22.093 | 70.35 | | 89 | -22.126 | 70.46 | | 90 | -22.126 | 70.46 | | 91 | -22.126 | 70.46 | | 92 | -21.745 | 69.24 | | 93 | 0.965 | * | | 94 | 0.965 | * | | 95 | 0.965 | * | | 109 | -14.959 | 47.63 | | 110 | -14.959 | 47.63 | | 111 | -14.959 | 47.63 | | 112 | -14.959 | 47.63 | | 113 | -14.959 | 47.63 | | 114 | -14.959 | 47.63 | | 115 | -14.959 | 47.63 | | 116 | -14.963 | 47.65 | | 117 | -14.404 | 45.87 | | 118 | -11.539 | 36.74 | | 119 | -11.318 | 36.04 | | 120 | -0.164 | 0.52 | | 134 | -0.740 | 2.36 | | 135 | -1.400 | 4.46 | | 136 | -1.410 | 4.49 | | 137 | -1.410 | 4.49 | | 138 | -1.410 | 4.49 | | 139 | -1.410 | 4.49 | | 140 | -1.410 | 4.49 | | 141 | -1.410 | 4.49 | | 142 | -1.410 | 4.49 | | 143 | -1.410 | 4.49 | | 144 | -1.410 | 4.49 | | 145 | -1.822 | 5.80 | | 146 | -1.798 | 5.73 | | 147 | 0.675 | * | | 148 | -0.014 | 0.04 | --- ### Receptor= A Partner= A Peptide_length= 12 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| | 1 | 4.600 | * | | 2 | -0.389 | 1.24 | | 3 | -0.126 | 0.40 | | 4 | 2.188 | * | | 5 | 1.841 | * | | 6 | 0.030 | * | | 7 | -4.503 | 14.34 | | 8 | -4.920 | 15.67 | | 9 | -4.920 | 15.67 | | 10 | -4.921 | 15.67 | | 11 | -4.921 | 15.67 | | 12 | -5.859 | 18.66 | | 13 | -3.600 | 11.46 | | 14 | -3.263 | 10.39 | | 15 | -3.828 | 12.19 | | 16 | -4.586 | 14.60 | | 17 | -8.214 | 26.16 | | 18 | -8.429 | 26.84 | | 19 | -6.952 | 22.14 | | 20 | -5.954 | 18.96 | | 21 | -5.406 | 17.21 | | 22 | -3.936 | 12.53 | | 23 | -5.854 | 18.64 | | 24 | -11.467 | 36.51 | | 25 | -11.462 | 36.50 | | 26 | -11.462 | 36.50 | | 27 | -11.462 | 36.50 | | 28 | -11.462 | 36.50 | | 29 | -8.389 | 26.71 | | 30 | -3.833 | 12.21 | | 31 | -3.889 | 12.38 | | 32 | -5.353 | 17.05 | | 33 | -5.052 | 16.09 | | 34 | -4.145 | 13.20 | | 35 | -4.167 | 13.27 | | 36 | 0.000 | * | | 49 | -8.427 | 26.83 | | 50 | -8.375 | 26.67 | | 51 | -8.375 | 26.67 | | 52 | -8.375 | 26.67 | | 53 | -8.375 | 26.67 | | 54 | -8.375 | 26.67 | | 55 | -8.375 | 26.67 | | 56 | -8.375 | 26.67 | | 57 | -8.375 | 26.67 | | 58 | -1.473 | 4.69 | | 59 | -0.061 | 0.19 | | 60 | -0.114 | 0.36 | | 61 | 0.052 | * | | 86 | -22.093 | 70.35 | | 87 | -22.093 | 70.35 | | 88 | -22.093 | 70.35 | | 89 | -22.126 | 70.46 | | 90 | -22.126 | 70.46 | | 91 | -22.126 | 70.46 | | 92 | -21.745 | 69.24 | | 93 | 0.965 | * | | 94 | 0.965 | * | | 95 | 0.965 | * | | 108 | -14.700 | 46.81 | | 109 | -14.959 | 47.63 | | 110 | -14.959 | 47.63 | | 111 | -14.959 | 47.63 | | 112 | -14.959 | 47.63 | | 113 | -14.959 | 47.63 | | 114 | -14.959 | 47.63 | | 115 | -14.959 | 47.63 | | 116 | -14.963 | 47.65 | | 117 | -14.404 | 45.87 | | 118 | -11.539 | 36.74 | | 119 | -11.318 | 36.04 | | 120 | -0.164 | 0.52 | | 133 | 0.363 | * | | 134 | 2.424 | * | | 135 | -0.740 | 2.36 | | 136 | -1.400 | 4.46 | | 137 | -1.410 | 4.49 | | 138 | -1.410 | 4.49 | | 139 | -1.410 | 4.49 | | 140 | -1.410 | 4.49 | | 141 | -1.410 | 4.49 | | 142 | -1.410 | 4.49 | | 143 | -1.410 | 4.49 | | 144 | -1.410 | 4.49 | | 145 | -1.822 | 5.80 | | 146 | -1.798 | 5.73 | | 147 | 0.675 | * | | 148 | -0.014 | 0.04 | --- ### Receptor= A Partner= A Peptide_length= 11 - Total interface score: -31.404 | Position | Interface score | Relative interface score (%) | |----------|-----------------|------------------------------| | 1 | 0.665 | * | | 2 | 4.600 | * | | 3 | -0.389 | 1.24 | | 4 | -0.126 | 0.40 | | 5 | 2.188 | * | | 6 | 1.841 | * | | 7 | 0.030 | * | | 8 | -4.503 | 14.34 | | 9 | -4.920 | 15.67 | | 10 | -4.920 | 15.67 | | 11 | -4.921 | 15.67 | | 12 | -5.859 | 18.66 | | 13 | -3.600 | 11.46 | | 14 | -3.263 | 10.39 | | 15 | -3.828 | 12.19 | | 16 | -4.586 | 14.60 | | 17 | -5.304 | 16.89 | | 18 | -4.297 | 13.68 | | 19 | -7.374 | 23.48 | | 20 | -6.622 | 21.09 | | 21 | -5.954 | 18.96 | | 22 | -5.405 | 17.21 | | 23 | -3.936 | 12.53 | | 24 | -5.854 | 18.64 | | 25 | -11.467 | 36.51 | | 26 | -11.462 | 36.50 | | 27 | -11.462 | 36.50 | | 28 | -11.462 | 36.50 | | 29 | -8.389 | 26.71 | | 30 | -3.833 | 12.21 | | 31 | -3.889 | 12.38 | | 32 | -5.353 | 17.05 | | 33 | -5.052 | 16.09 | | 34 | -4.145 | 13.20 | | 35 | -4.167 | 13.27 | | 36 | 0.000 | * | | 48 | -8.139 | 25.92 | | 49 | -8.225 | 26.19 | | 50 | -8.427 | 26.83 | | 51 | -8.375 | 26.67 | | 52 | -8.375 | 26.67 | | 53 | -8.375 | 26.67 | | 54 | -8.375 | 26.67 | | 55 | -8.375 | 26.67 | | 56 | -8.375 | 26.67 | | 57 | -8.375 | 26.67 | | 58 | -1.473 | 4.69 | | 59 | -0.061 | 0.19 | | 60 | -0.114 | 0.36 | | 61 | 0.052 | * | | 84 | -23.059 | 73.43 | | 85 | -22.093 | 70.35 | | 86 | -22.093 | 70.35 | | 87 | -22.093 | 70.35 | | 88 | -22.093 | 70.35 | | 89 | -22.126 | 70.46 | | 90 | -22.126 | 70.46 | | 91 | -22.126 | 70.46 | | 92 | -21.745 | 69.24 | | 93 | 0.965 | * | | 94 | 0.965 | * | | 95 | 0.965 | * | | 107 | -3.235 | 10.30 | | 108 | -3.559 | 11.33 | | 109 | -14.700 | 46.81 | | 110 | -14.959 | 47.63 | | 111 | -14.959

[emreuyguc04-bit]

Thank you so much. If it is possible can you run them for Receptor A Partner B for 10 and 15 amino acid length and also Receptor B and Partner A for 10 and 15 aa for both of the PDBs (6XI7 and 6XGU). Thanks again