Merge branch 'main' into continue_cf_conventions

Author: lazarusA

.github/workflows/CI.yml

@@ -3,8 +3,9 @@ on:
   pull_request:
   push:
     branches:
-      - master
-    tags: '*'
+      - main
+    tags:
+      - '*'
 jobs:
   test:
     name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
@@ -22,7 +23,7 @@ jobs:
         arch:
           - x64
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v6
       - uses: julia-actions/setup-julia@v2
         with:
           version: ${{ matrix.version }}
@@ -39,10 +40,12 @@ jobs:
             ${{ runner.os }}-
       - uses: julia-actions/julia-buildpkg@v1
       - uses: julia-actions/julia-runtest@v1
+        with:
+          coverage: true
         env:
           JULIA_NUM_THREADS: '4'
       - uses: julia-actions/julia-processcoverage@v1
       - uses: codecov/codecov-action@v5
         with:
           token: ${{ secrets.CODECOV_TOKEN}}
-          file: lcov.info
+          files: lcov.info

.github/workflows/Documenter.yml

@@ -3,11 +3,11 @@
 name: Documenter
 
 on:
-  # Runs on pushes targeting the `main` branch. Change this to `master` if you're
-  # using the `master` branch as the default branch.
+  # Runs on pushes targeting the `main` branch. Change this to `main` if you're
+  # using the `main` branch as the default branch.
   push:
     branches:
-      - master
+      - main
     tags: ['*']
   pull_request:
 
@@ -35,7 +35,7 @@ jobs:
       DISPLAY: ':0'
     steps:
       - name: Checkout
-        uses: actions/checkout@v4
+        uses: actions/checkout@v6
       - name: Setup Julia
         uses: julia-actions/setup-julia@v2
       - name: Pull Julia cache

.github/workflows/IntegrationTest.yml

@@ -1,7 +1,7 @@
 name: IntegrationTest
 on:
   push:
-    branches: [master]
+    branches: [main]
     tags: [v*]
   pull_request:
 
@@ -24,14 +24,14 @@ jobs:
           - {user: JuliaDataCubes, repo: EarthDataLab.jl}
 
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v6
       - uses: julia-actions/setup-julia@v2
         with:
           version: ${{ matrix.julia-version }}
           arch: x64
       - uses: julia-actions/julia-buildpkg@latest
       - name: Clone Downstream
-        uses: actions/checkout@v4
+        uses: actions/checkout@v6
         with:
           repository: ${{ matrix.package.user }}/${{ matrix.package.repo }}
           path: downstream

.github/workflows/benchmark.yml

@@ -7,7 +7,7 @@ jobs:
   Benchmark:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v4
+      - uses: actions/checkout@v6
       - uses: julia-actions/setup-julia@latest
         with:
           version: 1

CHANGELOG.md

@@ -0,0 +1,5 @@
+# Changelog
+
+## Unreleased
+
+- DiskArrayEngine integration

Project.toml

@@ -1,13 +1,14 @@
 name = "YAXArrays"
 uuid = "c21b50f5-aa40-41ea-b809-c0f5e47bfa5c"
 authors = ["Fabian Gans <[email protected]>"]
-version = "0.6.1"
+version = "0.7.0"
 
 [deps]
 CFTime = "179af706-886a-5703-950a-314cd64e0468"
 DataStructures = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
 Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
 DimensionalData = "0703355e-b756-11e9-17c0-8b28908087d0"
+DiskArrayEngine = "2d4b2e14-ccd6-4284-b8b0-2378ace7c126"
 DiskArrayTools = "fcd2136c-9f69-4db6-97e5-f31981721d63"
 DiskArrays = "3c3547ce-8d99-4f5e-a174-61eb10b00ae3"
 Distributed = "8ba89e20-285c-5b6f-9357-94700520ee1b"
@@ -32,14 +33,15 @@ WeightedOnlineStats = "bbac0a1f-7c9d-5672-960b-c6ca726e5d5d"
 YAXArrayBase = "90b8fcef-0c2d-428d-9c56-5f86629e9d14"
 
 [compat]
-CFTime = "0.0, 0.1"
-DataStructures = "0.17, 0.18"
+CFTime = "0.0, 0.1, 0.2"
+DataStructures = "0.17, 0.18, 0.19"
 DimensionalData = "0.27, 0.28, 0.29"
+DiskArrayEngine = "0.2"
 DiskArrayTools = "0.1.12"
-DiskArrays = "0.3, 0.4.10"
+DiskArrays = "0.4.18"
 DocStringExtensions = "0.8, 0.9"
 Glob = "1.3"
-Interpolations = "0.12, 0.13, 0.14, 0.15"
+Interpolations = "0.12, 0.13, 0.14, 0.15, 0.16"
 IntervalSets = "0.3, 0.4, 0.5, 0.6, 0.7"
 IterTools = "1"
 OffsetArrays = "1"
@@ -55,4 +57,4 @@ StatsBase = "0.32, 0.33, 0.34"
 Tables = "0.2, 1.0"
 WeightedOnlineStats = "0.3, 0.4, 0.5, 0.6"
 YAXArrayBase = "0.7.5"
-julia = "1.9"
+julia = "1.10"

README.md

@@ -2,7 +2,6 @@
 
 [![License: MIT](https://img.shields.io/badge/License-MIT-green.svg)](https://github.com/JuliaDataCubes/YAXArrays.jl/blob/main/LICENSE)
 [![][docs-stable-img]][docs-stable-url][![][docs-dev-img]][docs-dev-url][![DOI][zenodo-img]][zenodo-url][![][ci-img]][ci-url] [![][codecov-img]][codecov-url]
-[![Downloads](https://shields.io/endpoint?url=https://pkgs.genieframework.com/api/v1/badge/YAXArrays&label=Downloads)](https://pkgs.genieframework.com?packages=YAXArrays)
 
 <img src="docs/src/assets/logo.png" align="right" style="padding-left:10px;" width="150"/>
 
@@ -12,7 +11,7 @@
 [docs-stable-img]: https://img.shields.io/badge/docs-stable-blue.svg
 [docs-stable-url]: https://JuliaDataCubes.github.io/YAXArrays.jl/stable/
 
-[codecov-img]: https://codecov.io/gh/JuliaDataCubes/YAXArrays.jl/branch/master/graph/badge.svg
+[codecov-img]: https://codecov.io/gh/JuliaDataCubes/YAXArrays.jl/branch/main/graph/badge.svg
 [codecov-url]: https://codecov.io/gh/JuliaDataCubes/YAXArrays.jl
 
 [ci-img]: https://github.com/JuliaDataCubes/YAXArrays.jl/workflows/CI/badge.svg

docs/Project.toml

@@ -26,8 +26,15 @@ OnlineStats = "a15396b6-48d5-5d58-9928-6d29437db91e"
 PlotUtils = "995b91a9-d308-5afd-9ec6-746e21dbc043"
 SkipNan = "aed68c70-c8b0-4309-8cd1-d392a74f991a"
 Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
+TestItemRunner = "f8b46487-2199-4994-9208-9a1283c18c0a"
 TimeSeries = "9e3dc215-6440-5c97-bce1-76c03772f85e"
 WeightedOnlineStats = "bbac0a1f-7c9d-5672-960b-c6ca726e5d5d"
 YAXArrayBase = "90b8fcef-0c2d-428d-9c56-5f86629e9d14"
 YAXArrays = "c21b50f5-aa40-41ea-b809-c0f5e47bfa5c"
 Zarr = "0a941bbe-ad1d-11e8-39d9-ab76183a1d99"
+
+[sources]
+YAXArrays = {path = ".."}
+
+[compat]
+DocumenterVitepress = "0.2"

docs/make.jl

@@ -8,7 +8,7 @@ makedocs(; sitename="YAXArrays.jl",
     checkdocs=:all,
     format=DocumenterVitepress.MarkdownVitepress(
         repo = "github.com/JuliaDataCubes/YAXArrays.jl", # this must be the full URL!
-        devbranch = "master",
+        devbranch = "main",
         devurl = "dev";
     ),
     draft=false,
@@ -17,10 +17,10 @@ makedocs(; sitename="YAXArrays.jl",
     )
 # To edit the sidebar, you must edit `docs/src/.vitepress/config.mts`.
 
-deploydocs(; 
+DocumenterVitepress.deploydocs(; 
     repo="github.com/JuliaDataCubes/YAXArrays.jl.git", # this must be the full URL!
-    target="build", # this is where Vitepress stores its output
+    target=joinpath(@__DIR__, "build"),
     branch = "gh-pages",
-    devbranch="master",
+    devbranch="main",
     push_preview = true
 )

docs/package.json

@@ -1,21 +1,20 @@
 {
-  "scripts": {
-    "docs:dev": "vitepress dev build/.documenter",
-    "docs:build": "vitepress build build/.documenter",
-    "docs:preview": "vitepress preview build/.documenter"
-  },
   "devDependencies": {
-    "@nolebase/vitepress-plugin-enhanced-readabilities": "^2.14.0",
+    "@nolebase/vitepress-plugin-enhanced-readabilities": "^2.15.0",
     "@types/d3-format": "^3.0.4",
-    "@types/node": "^22.13.4",
+    "@types/node": "^22.13.9",
+    "markdown-it": "^14.1.0",
     "markdown-it-mathjax3": "^4.3.2",
-    "rollup-plugin-delete": "^3.0.0",
     "vitepress": "^1.6.3",
     "vitepress-plugin-tabs": "^0.6.0"
   },
+  "scripts": {
+    "docs:dev": "vitepress dev build/.documenter",
+    "docs:build": "vitepress build build/.documenter",
+    "docs:preview": "vitepress preview build/.documenter"
+  },
   "dependencies": {
     "d3-format": "^3.1.0",
-    "markdown-it": "^14.1.0",
     "markdown-it-footnote": "^4.0.0"
   }
 }