Pallet generation issue using Python 3.10.12 for astropy #8
Description
I have both dependencies (doxygen and xsltproc) installed. dlg-paletteGen also installs without any issue. astropy-6.1.7 is also installed. Howeve while trying to generate the pallet for astropy, I get the following error (complete log)
dlg-paletteGen -rsSm astropy . .
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - Recursive flag ON (cli.py:124)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - Split flag ON (cli.py:130)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - PROJECT_NAME: daliuge (cli.py:272)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - PROJECT_VERSION: 0.1 (cli.py:273)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - GIT_REPO: daliuge (cli.py:274)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - Input Directory: . (cli.py:276)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - Tag: (cli.py:277)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - Output File: . (cli.py:278)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - Allow missing EAGLE_START: True (cli.py:279)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - Module Path: astropy (cli.py:280)
2024-12-12T11:33:43 - dlg_paletteGen.settings - INFO - Splitting module astropy into sub-module palettes: ['astropy', 'astropy.compiler_version', 'astropy.config', 'astropy.conftest', 'astropy.constants', 'astropy.convolution', 'astropy.coordinates', 'astropy.cosmology', 'astropy.extern', 'astropy.io', 'astropy.logger', 'astropy.modeling', 'astropy.nddata', 'astropy.samp', 'astropy.stats', 'astropy.table', 'astropy.time', 'astropy.timeseries', 'astropy.uncertainty', 'astropy.units', 'astropy.utils', 'astropy.version', 'astropy.visualization', 'astropy.wcs'] (cli.py:224)
Traceback (most recent call last):
File "/home/oanwar/daliuge/daliuge/lib/python3.10/site-packages/dlg_paletteGen/module_base.py", line 362, in module_hook
mod = eval(mod_name)
File "", line 1, in
NameError: name 'astropy' is not defined
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/oanwar/daliuge/daliuge/bin/dlg-paletteGen", line 8, in
sys.exit(main())
File "/home/oanwar/daliuge/daliuge/lib/python3.10/site-packages/dlg_paletteGen/cli.py", line 287, in main
palettes_from_module(
File "/home/oanwar/daliuge/daliuge/lib/python3.10/site-packages/dlg_paletteGen/cli.py", line 236, in palettes_from_module
nodes, module_doc = nodes_from_module(m, recursive=top_recursive)
File "/home/oanwar/daliuge/daliuge/lib/python3.10/site-packages/dlg_paletteGen/cli.py", line 180, in nodes_from_module
modules, module_doc = module_hook(module_path, recursive=recursive)
File "/home/oanwar/daliuge/daliuge/lib/python3.10/site-packages/dlg_paletteGen/module_base.py", line 376, in module_hook
members = get_members(
File "/home/oanwar/daliuge/daliuge/lib/python3.10/site-packages/dlg_paletteGen/module_base.py", line 319, in get_members
nodes = get_class_members(m, parent=parent)
File "/home/oanwar/daliuge/daliuge/lib/python3.10/site-packages/dlg_paletteGen/module_base.py", line 51, in get_class_members
ann = inspect.get_annotations(
File "/usr/lib/python3.10/inspect.py", line 175, in get_annotations
return_value = {key:
File "/usr/lib/python3.10/inspect.py", line 176, in
value if not isinstance(value, str) else eval(value, globals, locals)
File "", line 1, in
NameError: name 'Callable' is not defined. Did you mean: 'callable'?
Here is the list of packages installed in the environment
Package Version Editable project location
annotated-types 0.7.0
anyio 4.7.0
anytree 2.12.1
astroid 3.3.6
astropy 6.1.7
astropy-iers-data 0.2024.12.9.0.36.21
attrs 24.2.0
bcrypt 4.2.1
beautifulsoup4 4.12.3
BlockDAG 1.1.0
boto3 1.35.78
botocore 1.35.78
bottle 0.13.2
certifi 2024.8.30
cffi 1.17.1
charset-normalizer 3.4.0
click 8.1.7
configobj 5.0.9
crc32c 2.7.1
cryptography 44.0.0
daliuge-common 4.8.0 /home/oanwar/daliuge/daliuge-common
daliuge-engine 4.8.0 /home/oanwar/daliuge/daliuge-engine
daliuge-translator 4.8.0 /home/oanwar/daliuge/daliuge-translator
dill 0.3.9
dlg_paletteGen 0.3.10
docker 7.1.0
et_xmlfile 2.0.0
exceptiongroup 1.2.2
fastapi 0.115.6
ftfy 6.3.1
future 1.0.0
future-fstrings 1.2.0
gevent 24.11.1
GPUtil 1.4.0
greenlet 3.1.1
h11 0.14.0
idna 3.10
ifaddr 0.2.0
isort 5.13.2
Jinja2 3.1.4
jmespath 1.0.1
jsonschema 4.23.0
jsonschema-specifications 2024.10.1
lockfile 0.12.2
mailchecker 6.0.13
MarkupSafe 3.0.2
mccabe 0.7.0
merklelib 1.0
metis 0.2a5
msgpack 1.1.0
netifaces 0.11.0
networkx 3.4.2
numpy 2.2.0
openpyxl 3.1.5
overrides 7.7.0
packaging 24.2
parameterized 0.9.0
paramiko 3.5.0
phonenumbers 8.13.51
pip 22.0.2
platformdirs 4.3.6
psutil 6.1.0
pycparser 2.22
pydantic 2.10.3
pydantic_core 2.27.1
pyerfa 2.0.1.5
pyext 0.8
pylint 3.3.2
PyNaCl 1.5.0
pyswarm 0.6
python-benedict 0.34.0
python-daemon 3.1.2
python-dateutil 2.9.0.post0
python-fsutil 0.14.1
python-multipart 0.0.19
python-slugify 8.0.4
PyYAML 6.0.2
pyzmq 25.1.1
referencing 0.35.1
requests 2.32.3
rpds-py 0.22.3
s3transfer 0.10.4
scp 0.15.0
setuptools 59.6.0
six 1.17.0
sniffio 1.3.1
soupsieve 2.6
starlette 0.41.3
text-unidecode 1.3
toml 0.10.2
tomli 2.2.1
tomlkit 0.13.2
typing_extensions 4.12.2
urllib3 1.26.20
uvicorn 0.18.0
wcwidth 0.2.13
wheel 0.45.1
xlrd 2.0.1
xmltodict 0.14.2
zeroconf 0.38.4
zerorpc 0.6.3
zope.event 5.0
zope.interface 7.2