README.md

phy-songview-plugin

Phy plugin for visualizing rasters of spikes aligned to song motifs.

Setup

This plugin requires cv2 be installed in your phy environment. Once that's done, you can simply copy over the plugin to your Phy directory as described in Phy's documentation.

Using the Plugin

Three additional files are required in your Phy directory for this plugin to work:

1. events.csv - a single-column .csv file of song-onset times (seconds);
2. song_length.csv - a single value representing the length of the song (seconds); and
3. spectrogram.png - a grayscale image of the song spectrogram.