gitbook report SDHB

[elenapapaleo]

refer to downstream analyses here: /data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026

[tedeschg]

Done

UpSet plot
/data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026/simple/venn_upset/UpSetPlot.png

ClinVar dotplots:
/data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026/simple/dotplot_clinvar_v2/dot_plot_germline_0.png

/data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026/simple/dotplot_clinvar_v2/dot_plot_germline_1.png

ClinVar lolliplots
/data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026/simple/dotplot_clinvar_v2/lolliplot_0.png

VUS dotplots
/data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026/simple/dotplot_vus_v2/

-VUS lolliplots
/data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026/simple/dotplot_vus_v2/lolliplot_0.png

COSMIC lolliplots
/data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026/simple/dotplot_cosmic_v2/lolliplot_0.png

BioPortal lolliplots
/data/raw_data/computational_data/mavisp_database_downstream/SDHB/downstream_analysis_03072026/simple/dotplot_cbioportal_v2/lolliplot_0.png

[mtiberti]

ensemble mode availalbe in mavisp_database_saturation but not available in downstream analysis - putting on hold until we sort where the problem is. Connected issue #1468