visu does not work

[myid55]

When I command ./generate_figures.py, the following output is generated on the command line.

============================================

['rm', '-r', 'results']
['mkdir', 'results']
['rm', 'scripts/allfigure.r']
['chmod', '+x', 'scripts/allfigure.r']
['/usr/bin/env', 'Rscript', './scripts/compute_time.r']
The following objects are masked from data (pos = 3):

example, nodes

Warning messages:
1: In xy.coords(x, y, xlabel, ylabel, log) :
1 y value <= 0 omitted from logarithmic plot
2: In plot.window(...) :
nonfinite axis limits [GScale(-inf,-inf,2, .); log=1]
Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/compute_time.pdf']
['/usr/bin/env', 'Rscript', './scripts/compute_time_per_service_node.r']
The following objects are masked from data (pos = 3):

example, nodes

Warning messages:
1: In xy.coords(x, y, xlabel, ylabel, log) :
1 y value <= 0 omitted from logarithmic plot
2: In plot.window(...) :
nonfinite axis limits [GScale(-inf,-inf,2, .); log=1]
Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/compute_time_per_service_node.pdf']
['/usr/bin/env', 'Rscript', './scripts/migration_avg_duration.r']
The following objects are masked from data (pos = 3):

example, nodes

Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/migration_avg_duration.pdf']
['/usr/bin/env', 'Rscript', './scripts/migration_count.r']
The following objects are masked from data (pos = 3):

example, nodes

Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/migration_count.pdf']
['/usr/bin/env', 'Rscript', './scripts/migration_time.r']
The following objects are masked from data (pos = 3):

example, nodes

Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/migration_time.pdf']
['/usr/bin/env', 'Rscript', './scripts/reconfigure_failure_count.r']
The following objects are masked from data (pos = 3):

example, nodes

Warning messages:
1: In xy.coords(x, y, xlabel, ylabel, log) :
1 y value <= 0 omitted from logarithmic plot
2: In plot.window(...) :
nonfinite axis limits [GScale(-inf,-inf,2, .); log=1]
Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/reconfigure_failure_count.pdf']
['/usr/bin/env', 'Rscript', './scripts/reconfigure_noreconf_count.r']
The following objects are masked from data (pos = 3):

example, nodes

Warning messages:
1: In xy.coords(x, y, xlabel, ylabel, log) :
1 y value <= 0 omitted from logarithmic plot
2: In plot.window(...) :
nonfinite axis limits [GScale(-inf,-inf,2, .); log=1]
Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/reconfigure_noreconf_count.pdf']
['/usr/bin/env', 'Rscript', './scripts/reconfigure_success_count.r']
The following objects are masked from data (pos = 3):

example, nodes

Warning messages:
1: In xy.coords(x, y, xlabel, ylabel, log) :
1 y value <= 0 omitted from logarithmic plot
2: In plot.window(...) :
nonfinite axis limits [GScale(-inf,-inf,2, .); log=1]
Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/reconfigure_success_count.pdf']
['/usr/bin/env', 'Rscript', './scripts/success_psize.r']
The following objects are masked from data (pos = 3):

example, nodes

Error in plot.window(...) : Logarithmic axis must have positive limits
Calls: plot -> plot.default -> localWindow -> plot.window
In addition: Warning message:
In xy.coords(x, y, xlabel, ylabel, log) :
1 y value <= 0 omitted from logarithmic plot
Execution halted

['mv', 'Rplots.pdf', 'results/success_psize.pdf']
['/usr/bin/env', 'Rscript', './scripts/total_time.r']
The following objects are masked from data (pos = 3):

example, nodes

Warning messages:
1: In xy.coords(x, y, xlabel, ylabel, log) :
1 y value <= 0 omitted from logarithmic plot
2: In plot.window(...) :
nonfinite axis limits [GScale(-inf,-inf,2, .); log=1]
Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/total_time.pdf']
['/usr/bin/env', 'Rscript', './scripts/violation_time.r']
The following objects are masked from data (pos = 3):

example, nodes

Error: unexpected symbol in:
"legend(1, g_range[2], c("example"), cex=2, lwd=2.5
col"
Execution halted

['mv', 'Rplots.pdf', 'results/violation_time.pdf']

In the results directory, there are pdf files but the contents are empty; they contain legend ("example") and labels only.

[badock]

Hello,

thanks for reporting this issue! I am going to investigate : could you provide more details about the simulation you conducted :

• scheduling algorithm
• infrastructure size
• number of VMs

[myid55]

I followed the instruction below:
https://github.com/BeyondTheClouds/VMPlaceS/blob/master/README.md
I did not modify the configuration from the example.

[badock]

Hello, we made some corrections on the visualization scripts and we managed to produce visualizations for a simple experiment (example algorithm with 10, 20, 40 physical nodes). Despite few warning messages, the visualization are working (I will investigate these warning messages later).

I didn't notice that the result files listed in your screenshot were not empty : there is a single red dot. Did you run a unique simulation, or did you rather run few simulations with distinct (number of physical nodes, number of virtual machines) parameters? In the case you ran several simulations, don't forget to put the events.json file produced by each simulation in the visu/events folder (beware of overwriting existing event.json file), as depicted in the updated screenshot of the visu README file:
https://github.com/BeyondTheClouds/VMPlaceS/tree/master/visu#generate-the-diagrams

Don't hesitate to tell us if you still encounter issues with visualization.

Best regards,

VMPlaceS team