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"segmentation" } +] + +[tool.poetry.dependencies] +python = "^3.8.1" +# Core ML/DL Dependencies +torch = ">=1.2" +torchvision = "*" +torchaudio = "*" +deepspeed = "*" +timm = "0.4.12" +triton = {version = "1.0.0", optional = true} +tensorboard = "2.9.0" +tensorboardX = "1.8" + +# Data Processing +pandas = "*" +numpy = "*" +scipy = "*" +einops = "*" +scikit-learn = "*" + +# Computer Vision +opencv-python = "*" +pillow = "*" +av = "*" +decord = {version = "*", optional = true} + +# Visualization +matplotlib = "*" + +[tool.poetry.group.dev.dependencies] +pytest = "^7.4.0" +pytest-cov = "^4.1.0" +pytest-mock = "^3.11.1" +black = "^23.7.0" +isort = "^5.12.0" +flake8 = "^6.1.0" +mypy = "^1.4.1" +pre-commit = "^3.3.3" + +[tool.poetry.scripts] +test = "pytest:main" +tests = "pytest:main" + +[tool.pytest.ini_options] +minversion = "7.0" +testpaths = ["tests"] +python_files = ["test_*.py", "*_test.py"] +python_classes = ["Test*", "*Tests"] +python_functions = ["test_*"] +addopts = [ + "-ra", + "--strict-markers", + "--cov=.", + "--cov-branch", + "--cov-report=term-missing", + "--cov-report=html:htmlcov", + "--cov-report=xml:coverage.xml", + "--cov-fail-under=0", + "-vv", + "--tb=short", + "--maxfail=1" +] +markers = [ + "unit: Unit tests (fast, isolated tests)", + "integration: Integration tests (may require external resources)", + "slow: Slow tests (use sparingly)" +] +filterwarnings = [ + "ignore::DeprecationWarning", + "ignore::PendingDeprecationWarning" +] + +[tool.coverage.run] +source = ["."] +omit = [ + "*/tests/*", + "*/test_*.py", + "*/__pycache__/*", + "*/site-packages/*", + "setup.py", + "*/migrations/*", + "*/__init__.py", + "*/conftest.py", + "*/venv/*", + "*/env/*", + ".venv/*" +] + +[tool.coverage.report] +precision = 2 +show_missing = true +skip_covered = false +exclude_lines = [ + "pragma: no cover", + "def __repr__", + "if self.debug:", + "if settings.DEBUG", + "raise AssertionError", + "raise NotImplementedError", + "if 0:", + "if __name__ == .__main__.:", + "if TYPE_CHECKING:", + "class .*\\bProtocol\\):", + "@(abc\\.)?abstractmethod" +] + +[tool.coverage.html] +directory = "htmlcov" + +[tool.coverage.xml] +output = "coverage.xml" + +[tool.isort] +profile = "black" +multi_line_output = 3 +include_trailing_comma = true +force_grid_wrap = 0 +use_parentheses = true +ensure_newline_before_comments = true +line_length = 88 +skip_gitignore = true + +[tool.black] +line-length = 88 +target-version = ['py38', 'py39', 'py310', 'py311'] +include = '\.pyi?$' +extend-exclude = ''' +/( + # directories + \.eggs + | \.git + | \.hg + | \.mypy_cache + | \.tox + | \.venv + | build + | dist +)/ +''' + +[tool.mypy] +python_version = "3.8" +warn_return_any = true +warn_unused_configs = true +disallow_untyped_defs = false +ignore_missing_imports = true +exclude = [ + "tests/", + "venv/", + ".venv/", + "build/", + "dist/" +] + +[build-system] +requires = ["poetry-core>=1.0.0"] +build-backend = "poetry.core.masonry.api" \ No newline at end of file diff --git a/tests/__init__.py b/tests/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/tests/conftest.py b/tests/conftest.py new file mode 100644 index 0000000..80b3dd1 --- /dev/null +++ b/tests/conftest.py @@ -0,0 +1,191 @@ +"""Shared pytest fixtures and configuration for UniRepLKNet tests.""" + +import os +import tempfile +from pathlib import Path +from typing import Generator, Dict, Any +from unittest.mock import MagicMock + +import pytest +import torch +import numpy as np + + +@pytest.fixture +def temp_dir() -> Generator[Path, None, None]: + """Create a temporary directory for test files.""" + with tempfile.TemporaryDirectory() as tmpdir: + yield Path(tmpdir) + + +@pytest.fixture +def mock_config() -> Dict[str, Any]: + """Provide a mock configuration dictionary for testing.""" + return { + "model": { + "name": "unireplknet", + "num_classes": 10, + "input_size": 224, + "patch_size": 16, + "embed_dim": 768, + "depth": 12, + "num_heads": 12, + }, + "training": { + "batch_size": 32, + "learning_rate": 0.001, + "epochs": 100, + "warmup_epochs": 5, + "weight_decay": 0.05, + }, + "data": { + "dataset": "test_dataset", + "data_path": "/tmp/test_data", + "num_workers": 4, + "pin_memory": True, + }, + "augmentation": { + "mixup": 0.8, + "cutmix": 1.0, + "cutmix_minmax": None, + "mixup_prob": 1.0, + "mixup_switch_prob": 0.5, + "mixup_mode": "batch", + }, + } + + +@pytest.fixture +def sample_image_tensor() -> torch.Tensor: + """Create a sample image tensor for testing.""" + return torch.randn(1, 3, 224, 224) + + +@pytest.fixture +def sample_batch() -> Dict[str, torch.Tensor]: + """Create a sample batch of data for testing.""" + batch_size = 4 + return { + "images": torch.randn(batch_size, 3, 224, 224), + "labels": torch.randint(0, 10, (batch_size,)), + "masks": torch.ones(batch_size, 224, 224), + } + + +@pytest.fixture +def sample_audio_tensor() -> torch.Tensor: + """Create a sample audio tensor for testing.""" + # 1 second of audio at 16kHz sample rate + return torch.randn(1, 16000) + + +@pytest.fixture +def sample_video_tensor() -> torch.Tensor: + """Create a sample video tensor for testing.""" + # batch_size=1, num_frames=8, channels=3, height=224, width=224 + return torch.randn(1, 8, 3, 224, 224) + + +@pytest.fixture +def sample_point_cloud() -> torch.Tensor: + """Create a sample point cloud tensor for testing.""" + # num_points=1024, dimensions=3 (x, y, z) + return torch.randn(1024, 3) + + +@pytest.fixture +def sample_time_series() -> np.ndarray: + """Create a sample time series data for testing.""" + # 100 time steps with 5 features + return np.random.randn(100, 5) + + +@pytest.fixture +def mock_model() -> MagicMock: + """Create a mock model for testing.""" + model = MagicMock() + model.forward.return_value = torch.randn(1, 10) # Mock output + model.parameters.return_value = [torch.randn(10, 10)] + model.state_dict.return_value = {"layer1.weight": torch.randn(10, 10)} + return model + + +@pytest.fixture +def mock_dataset() -> MagicMock: + """Create a mock dataset for testing.""" + dataset = MagicMock() + dataset.__len__.return_value = 100 + dataset.__getitem__.return_value = (torch.randn(3, 224, 224), 0) + return dataset + + +@pytest.fixture +def mock_dataloader(mock_dataset) -> MagicMock: + """Create a mock dataloader for testing.""" + dataloader = MagicMock() + dataloader.__iter__.return_value = iter([ + (torch.randn(32, 3, 224, 224), torch.randint(0, 10, (32,))) + for _ in range(3) + ]) + dataloader.dataset = mock_dataset + return dataloader + + +@pytest.fixture +def device() -> torch.device: + """Get the appropriate device for testing.""" + return torch.device("cuda" if torch.cuda.is_available() else "cpu") + + +@pytest.fixture +def random_seed() -> int: + """Set and return a fixed random seed for reproducible tests.""" + seed = 42 + torch.manual_seed(seed) + np.random.seed(seed) + return seed + + +@pytest.fixture(autouse=True) +def cleanup_gpu_memory(): + """Automatically clean up GPU memory after each test.""" + yield + if torch.cuda.is_available(): + torch.cuda.empty_cache() + + +@pytest.fixture +def checkpoint_path(temp_dir: Path) -> Path: + """Create a path for saving checkpoints during tests.""" + checkpoint_dir = temp_dir / "checkpoints" + checkpoint_dir.mkdir(exist_ok=True) + return checkpoint_dir / "test_checkpoint.pth" + + +@pytest.fixture +def sample_checkpoint(checkpoint_path: Path, mock_model) -> Path: + """Create a sample checkpoint file for testing.""" + checkpoint = { + "epoch": 10, + "model_state_dict": mock_model.state_dict(), + "optimizer_state_dict": {"param_groups": [{"lr": 0.001}]}, + "loss": 0.5, + "accuracy": 0.85, + } + torch.save(checkpoint, checkpoint_path) + return checkpoint_path + + +@pytest.fixture +def env_setup(monkeypatch): + """Set up environment variables for testing.""" + monkeypatch.setenv("CUDA_VISIBLE_DEVICES", "0") + monkeypatch.setenv("OMP_NUM_THREADS", "1") + monkeypatch.setenv("TORCH_HOME", "/tmp/torch_cache") + + +@pytest.fixture +def capture_logs(caplog): + """Fixture to capture and return logs during tests.""" + with caplog.at_level("DEBUG"): + yield caplog \ No newline at end of file diff --git a/tests/integration/__init__.py b/tests/integration/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/tests/test_setup_validation.py b/tests/test_setup_validation.py new file mode 100644 index 0000000..7abe78a --- /dev/null +++ b/tests/test_setup_validation.py @@ -0,0 +1,189 @@ +"""Validation tests to ensure the testing infrastructure is properly set up.""" + +import sys +from pathlib import Path + +import pytest +import torch +import numpy as np + + +class TestSetupValidation: + """Validation tests for the testing infrastructure.""" + + def test_pytest_is_installed(self): + """Verify pytest is installed and accessible.""" + assert "pytest" in sys.modules + + def test_coverage_is_installed(self): + """Verify pytest-cov is installed.""" + try: + import pytest_cov + assert pytest_cov is not None + except ImportError: + pytest.fail("pytest-cov is not installed") + + def test_mock_is_installed(self): + """Verify pytest-mock is installed.""" + try: + import pytest_mock + assert pytest_mock is not None + except ImportError: + pytest.fail("pytest-mock is not installed") + + def test_project_structure(self): + """Verify the project structure is correct.""" + project_root = Path(__file__).parent.parent + assert project_root.exists() + assert (project_root / "tests").exists() + assert (project_root / "tests" / "__init__.py").exists() + assert (project_root / "tests" / "unit").exists() + assert (project_root / "tests" / "unit" / "__init__.py").exists() + assert (project_root / "tests" / "integration").exists() + assert (project_root / "tests" / "integration" / "__init__.py").exists() + assert (project_root / "tests" / "conftest.py").exists() + + def test_temp_dir_fixture(self, temp_dir): + """Test the temp_dir fixture works correctly.""" + assert temp_dir.exists() + assert temp_dir.is_dir() + + # Test we can write to the temp directory + test_file = temp_dir / "test.txt" + test_file.write_text("test content") + assert test_file.exists() + assert test_file.read_text() == "test content" + + def test_mock_config_fixture(self, mock_config): + """Test the mock_config fixture provides expected structure.""" + assert isinstance(mock_config, dict) + assert "model" in mock_config + assert "training" in mock_config + assert "data" in mock_config + assert mock_config["model"]["name"] == "unireplknet" + + def test_sample_tensors(self, sample_image_tensor, sample_batch, + sample_audio_tensor, sample_video_tensor, + sample_point_cloud): + """Test all sample tensor fixtures have correct shapes.""" + # Image tensor + assert sample_image_tensor.shape == (1, 3, 224, 224) + assert isinstance(sample_image_tensor, torch.Tensor) + + # Batch + assert sample_batch["images"].shape == (4, 3, 224, 224) + assert sample_batch["labels"].shape == (4,) + assert sample_batch["masks"].shape == (4, 224, 224) + + # Audio tensor + assert sample_audio_tensor.shape == (1, 16000) + + # Video tensor + assert sample_video_tensor.shape == (1, 8, 3, 224, 224) + + # Point cloud + assert sample_point_cloud.shape == (1024, 3) + + def test_mock_model_fixture(self, mock_model): + """Test the mock_model fixture behaves correctly.""" + # Test forward pass + output = mock_model.forward(torch.randn(1, 3, 224, 224)) + assert output.shape == (1, 10) + + # Test parameters + params = list(mock_model.parameters()) + assert len(params) > 0 + + # Test state dict + state_dict = mock_model.state_dict() + assert "layer1.weight" in state_dict + + def test_device_fixture(self, device): + """Test the device fixture returns a valid device.""" + assert isinstance(device, torch.device) + assert device.type in ["cpu", "cuda"] + + def test_random_seed_fixture(self, random_seed): + """Test the random seed fixture ensures reproducibility.""" + assert random_seed == 42 + + # Test reproducibility + tensor1 = torch.randn(5) + np_array1 = np.random.randn(5) + + # Reset seeds + torch.manual_seed(random_seed) + np.random.seed(random_seed) + + tensor2 = torch.randn(5) + np_array2 = np.random.randn(5) + + assert torch.allclose(tensor1, tensor2) + assert np.allclose(np_array1, np_array2) + + @pytest.mark.unit + def test_unit_marker(self): + """Test that unit test marker works.""" + assert True + + @pytest.mark.integration + def test_integration_marker(self): + """Test that integration test marker works.""" + assert True + + @pytest.mark.slow + def test_slow_marker(self): + """Test that slow test marker works.""" + assert True + + def test_checkpoint_fixtures(self, checkpoint_path, sample_checkpoint): + """Test checkpoint-related fixtures.""" + assert checkpoint_path.parent.exists() + assert sample_checkpoint.exists() + + # Load and verify checkpoint + checkpoint = torch.load(sample_checkpoint, map_location="cpu") + assert checkpoint["epoch"] == 10 + assert checkpoint["loss"] == 0.5 + assert checkpoint["accuracy"] == 0.85 + + def test_env_setup_fixture(self, env_setup): + """Test environment setup fixture.""" + import os + assert os.environ.get("OMP_NUM_THREADS") == "1" + + def test_capture_logs_fixture(self, capture_logs): + """Test log capturing fixture.""" + import logging + logger = logging.getLogger(__name__) + logger.debug("Test debug message") + logger.info("Test info message") + + assert "Test debug message" in capture_logs.text + assert "Test info message" in capture_logs.text + + +@pytest.mark.parametrize("module_name", [ + "Audio", "Image", "Point", "Video", "detection", "segmentation" +]) +def test_module_directories_exist(module_name): + """Test that all module directories exist.""" + project_root = Path(__file__).parent.parent + module_path = project_root / module_name + assert module_path.exists(), f"Module directory {module_name} does not exist" + + +def test_pyproject_toml_exists(): + """Test that pyproject.toml exists and has correct structure.""" + project_root = Path(__file__).parent.parent + pyproject_path = project_root / "pyproject.toml" + assert pyproject_path.exists() + + # Basic validation of content + content = pyproject_path.read_text() + assert "[tool.poetry]" in content + assert "[tool.pytest.ini_options]" in content + assert "[tool.coverage.run]" in content + assert "pytest" in content + assert "pytest-cov" in content + assert "pytest-mock" in content \ No newline at end of file diff --git a/tests/unit/__init__.py b/tests/unit/__init__.py new file mode 100644 index 0000000..e69de29